RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
SRPRA-202ENST00000527817 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 AUTS2Q8WXX7 1259 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 TRAIPQ9BWF2 469 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 KCNK12Q9HB15 430 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
SRPRA-202ENST00000527817 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
SRPRA-202ENST00000527817 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
SRPRA-202ENST00000527817 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
SRPRA-202ENST00000527817 GALTP07902 379 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 GPC3P51654 580 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 CDC42EP1Q00587 391 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 SFXN1Q9H9B4 322 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 WNT16Q9UBV4 365 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 STK39Q9UEW8 545 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 FBXL21Q9UKT6 434 aa13.92□□□□□ -0.18
SRPRA-202ENST00000527817 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
SRPRA-202ENST00000527817 SKIP12755 728 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 PHKA2P46019 1235 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 C15orf39Q6ZRI6 1047 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
SRPRA-202ENST00000527817 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 SIX5Q8N196 739 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 LRRC2Q9BYS8 371 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 CEP250Q9BV73 2442 aa13.91□□□□□ -0.18
SRPRA-202ENST00000527817 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 OTOGLQ3ZCN5 2332 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 SLC27A2O14975 620 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 ZNF862O60290 1169 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 LILRB3O75022 631 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 ZNF623O75123 536 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 FGFR4P22455 802 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 CLCN4P51793 760 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
SRPRA-202ENST00000527817 PTPN14Q15678 1187 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 JAKMIP3Q5VZ66 844 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 APOA5Q6Q788 366 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 EXOC6Q8TAG9 804 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 RMDN1Q96DB5 314 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
SRPRA-202ENST00000527817 KLHL5Q96PQ7 755 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
SRPRA-202ENST00000527817 TPRP12270 2363 aaKnown RBP13.9□□□□□ -0.18
SRPRA-202ENST00000527817 OFD1O75665 1012 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 OATP04181 439 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 KLRC2P26717 231 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 CYP26C1Q6V0L0 522 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 DGLUCYQ7Z3D6 616 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 CMASQ8NFW8 434 aaPredicted RBP13.89□□□□□ -0.19
SRPRA-202ENST00000527817 BCL7CQ8WUZ0 217 aaPredicted RBP13.89□□□□□ -0.19
SRPRA-202ENST00000527817 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 VN1R3Q9BXE9 311 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 EMILIN2Q9BXX0 1053 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 GCOM2Q9BZD3 368 aaPredicted RBP13.89□□□□□ -0.19
SRPRA-202ENST00000527817 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
SRPRA-202ENST00000527817 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 DENND4AQ7Z401 1863 aa13.89□□□□□ -0.19
SRPRA-202ENST00000527817 MED19A0JLT2 244 aaPredicted RBP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 KRBA1A5PL33 1030 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 STK25O00506 426 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 CNPP09543 421 aaKnown RBP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 CIITAP33076 1130 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 PUM1Q14671 1186 aaKnown RBP eCLIP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 RTN1Q16799 776 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 LPPQ93052 612 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 NXPE3Q969Y0 559 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 INO80BQ9C086 356 aaPredicted RBP13.88□□□□□ -0.19
SRPRA-202ENST00000527817 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 SAMM50Q9Y512 469 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 WDR81Q562E7 1941 aa13.88□□□□□ -0.19
SRPRA-202ENST00000527817 EPG5Q9HCE0 2579 aa13.87□□□□□ -0.19
SRPRA-202ENST00000527817 ESYT2A0FGR8 921 aa13.87□□□□□ -0.19
SRPRA-202ENST00000527817 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms