RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	IKBKG	Q9Y6K9	419 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	LRP6	O75581	1613 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NID2	Q14112	1375 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TIAM2	Q8IVF5	1701 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	LAMA3	Q16787	3333 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SH3PXD2B	A1X283	911 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SOWAHD	A6NJG2	315 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GOLGA8B	A8MQT2	603 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288		A8MXQ7	604 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF701	M0R085	212 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	AREL1	O15033	823 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NVL	O15381	856 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP3K7	O43318	606 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	STK10	O94804	968 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	KIF4A	O95239	1232 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	FKBP9	O95302	570 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	HNRNPF	P52597	415 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASGRF1	Q13972	1273 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NIPAL1	Q6NVV3	410 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CCDC174	Q6PII3	467 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NET1	Q7Z628	596 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	VPS37A	Q8NEZ2	397 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CAGE1	Q8TC20	777 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	RIN2	Q8WYP3	895 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	IP6K1	Q92551	441 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DGCR14	Q96DF8	476 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	OTUD5	Q96G74	571 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	HIC2	Q96JB3	615 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TCF12	Q99081	682 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ABHD10	Q9NUJ1	306 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MCM9	Q9NXL9	1143 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	HBS1L	Q9Y450	684 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CSAD	Q9Y600	493 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	COMMD10	Q9Y6G5	202 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TJP1	Q07157	1748 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SIPA1L3	O60292	1781 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CENPBD1	B2RD01	187 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPECC1L-ADORA2A	F8WAN1	911 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GOLGA8M	H3BSY2	632 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZBTB7A	O95365	584 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CYP2C9	P11712	490 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	THOP1	P52888	689 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	POLE2	P56282	527 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DPYS	Q14117	519 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	R3HDM1	Q15032	1099 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DLGAP5	Q15398	846 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	RNF220	Q5VTB9	566 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GRAMD4	Q6IC98	578 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DUS1L	Q6P1R4	473 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ILDR1	Q86SU0	546 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SFR1	Q86XK3	245 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CARNMT1	Q8N4J0	409 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF579	Q8NAF0	562 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TBC1D16	Q8TBP0	767 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CERK	Q8TCT0	537 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SCFD1	Q8WVM8	642 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZFR	Q96KR1	1074 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	EYA1	Q99502	592 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	OLFM1	Q99784	485 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SAMD15	Q9P1V8	674 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTBD7	Q9P203	1132 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DNAJC12	Q9UKB3	198 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	HYOU1	Q9Y4L1	999 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC4A4	Q9Y6R1	1079 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLIT1	O75093	1534 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	FLT4	P35916	1363 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ALOX15B	O15296	676 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	AKR1B10	O60218	316 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TSPAN1	O60635	241 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRPA1	O75762	1119 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	VAV1	P15498	845 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PLCG2	P16885	1265 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	VCL	P18206	1134 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT4	P19013	534 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CRABP2	P29373	138 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	HOXC9	P31274	260 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPAG1	Q07617	926 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MTHFSD	Q2M296	383 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMEM67	Q5HYA8	995 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ACAD11	Q709F0	780 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	MICU3	Q86XE3	530 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	NLGN1	Q8N2Q7	840 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GIPC2	Q8TF65	315 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PYROXD1	Q8WU10	500 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	STARD8	Q92502	1023 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	CCDC42	Q96M95	316 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	PLGRKT	Q9HBL7	147 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	GPAM	Q9HCL2	828 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	EURL	Q9NYK6	297 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	ADD3	Q9UEY8	706 aa	Known RBP	4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	AGAP1	Q9UPQ3	857 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	DMTF1	Q9Y222	760 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	SUGT1	Q9Y2Z0	365 aa		4.14	□□□□□ -1.75
FAM49B-225	ENST00000523288	COL6A3	P12111	3177 aa		4.13	□□□□□ -1.75
FAM49B-225	ENST00000523288		F8W8V4	182 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms