RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 POLR3FQ9H1D9 316 aaPredicted RBP17.36■□□□□ 0.37
USP42-207ENST00000521713 PRPSAP2O60256 369 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 EYA4O95677 639 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 PLCB4Q15147 1175 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 ARL13BQ3SXY8 428 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 ERICH1Q86X53 443 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 PFDN4Q9NQP4 134 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 PFASO15067 1338 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 TMEM131LA2VDJ0 1609 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 GOLGA8QA0A0J9YX86 632 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 GOLGA8OA6NCC3 632 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 GOLGA8NF8WBI6 632 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 CIITAP33076 1130 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 GUF1Q8N442 669 aaKnown RBP17.36■□□□□ 0.37
USP42-207ENST00000521713 CHST13Q8NET6 341 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 CCL15-CCL14A0A0B4J2E2 113 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 EIF4A3P38919 411 aaKnown RBP17.36■□□□□ 0.37
USP42-207ENST00000521713 CCL15Q16663 113 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 GLE1Q53GS7 698 aaKnown RBP17.36■□□□□ 0.37
USP42-207ENST00000521713 NAALADL2Q58DX5 795 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 TSC22D3Q99576 134 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 DPH5Q9H2P9 285 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 PDHBP11177 359 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 TMEM35BQ8NCS4 154 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 SLC26A4O43511 780 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 NR3C2P08235 984 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 GPC3P51654 580 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 SESN3P58005 492 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 CC2D1AQ6P1N0 951 aaPredicted RBP17.35■□□□□ 0.37
USP42-207ENST00000521713 ADAT2Q7Z6V5 191 aaKnown RBP17.35■□□□□ 0.37
USP42-207ENST00000521713 SEPT1Q8WYJ6 367 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.35■□□□□ 0.37
USP42-207ENST00000521713 MCF2LO15068 1137 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 MAFGO15525 162 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 TSPY1Q01534 308 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 ZNF699Q32M78 642 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 HIBCHQ6NVY1 386 aaPredicted RBP17.35■□□□□ 0.37
USP42-207ENST00000521713 KATNAL1Q9BW62 490 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 ITSN1Q15811 1721 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 PPP2R5CQ13362 524 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 FAM213AQ9BRX8 229 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 ABCB6Q9NP58 842 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 ANGPTL2Q9UKU9 493 aa17.35■□□□□ 0.37
USP42-207ENST00000521713 AP3M2P53677 418 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 DYNC1I2Q13409 638 aaKnown RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 RHOT2Q8IXI1 618 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 PBKQ96KB5 322 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 EPB41L4AQ9HCS5 686 aaPredicted RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 A0A087WWV3 80 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 KIAA0391O15091 583 aaKnown RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 GGPS1O95749 300 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 KRT1P04264 644 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 TBXAS1P24557 533 aaPredicted RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 HAUS8Q9BT25 410 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 ADARB2Q9NS39 739 aaKnown RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 DGAT1O75907 488 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 ESRRGP62508 458 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
USP42-207ENST00000521713 CCNYQ8ND76 341 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 DRC3Q9H069 523 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 SMARCAD1Q9H4L7 1026 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 EPB41L5Q9HCM4 733 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 DNAJC12Q9UKB3 198 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 SLIT1O75093 1534 aa17.34■□□□□ 0.37
USP42-207ENST00000521713 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 ANKRD20A8PQ5CZ79 823 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 ANKRD20A2Q5SQ80 823 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 ANKRD20A1Q5TYW2 823 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 FMR1NBQ8N0W7 255 aaPredicted RBP17.33■□□□□ 0.37
USP42-207ENST00000521713 ZDHHC15Q96MV8 337 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 CENPKQ9BS16 269 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 CCSER1Q9C0I3 900 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 NHEJ1Q9H9Q4 299 aaPredicted RBP17.33■□□□□ 0.37
USP42-207ENST00000521713 POLLQ9UGP5 575 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 LCMT1Q9UIC8 334 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 CUL1Q13616 776 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 SLC8A2Q9UPR5 921 aa17.33■□□□□ 0.37
USP42-207ENST00000521713 PGRMC1O00264 195 aaKnown RBP17.33■□□□□ 0.36
USP42-207ENST00000521713 MAP3K7O43318 606 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 GH1P01241 217 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.36
USP42-207ENST00000521713 GARSP41250 739 aaKnown RBP17.33■□□□□ 0.36
USP42-207ENST00000521713 NAA35Q5VZE5 725 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 TTC19Q6DKK2 380 aaPredicted RBP17.33■□□□□ 0.36
USP42-207ENST00000521713 BZW1Q7L1Q6 419 aaKnown RBP17.33■□□□□ 0.36
USP42-207ENST00000521713 MAD1L1Q9Y6D9 718 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 TNS2Q63HR2 1409 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 DEPDC5O75140 1603 aa17.33■□□□□ 0.36
USP42-207ENST00000521713 SGK1O00141 431 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms