RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 APEX1P27695 318 aaKnown RBP9.34□□□□□ -0.91
LSM1-202ENST00000520286 MALLQ13021 153 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 TSHZ1Q6ZSZ6 1077 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 DENND1CQ8IV53 801 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 NRG4Q8WWG1 115 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 STRBPQ96SI9 672 aaKnown RBP9.34□□□□□ -0.91
LSM1-202ENST00000520286 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 FTSJ1Q9UET6 329 aa9.34□□□□□ -0.91
LSM1-202ENST00000520286 CCDC154A6NI56 674 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 H3BML4 177 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 HTRA2O43464 458 aaPredicted RBP9.33□□□□□ -0.92
LSM1-202ENST00000520286 ADAMTS4O75173 837 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 TUSC2O75896 110 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 EDNRBP24530 442 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 PDE6BP35913 854 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 GPR15P49685 360 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 MORC3Q14149 939 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 ADRM1Q16186 407 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 TMC5Q6UXY8 1006 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 CD300LDQ6UXZ3 194 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 C11orf96Q7Z7L8 435 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 ZC3H18Q86VM9 953 aaKnown RBP9.33□□□□□ -0.92
LSM1-202ENST00000520286 FAM26EQ8N5C1 309 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 WDR48Q8TAF3 677 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 KIRREL1Q96J84 757 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 NOL10Q9BSC4 688 aaKnown RBP9.33□□□□□ -0.92
LSM1-202ENST00000520286 BTBD2Q9BX70 525 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 SLC6A17Q9H1V8 727 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
LSM1-202ENST00000520286 EVLQ9UI08 416 aaPredicted RBP9.33□□□□□ -0.92
LSM1-202ENST00000520286 A0A0A6YYJ9 748 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 ABLIM1O14639 778 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 HRGP04196 525 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 NFATC3Q12968 1075 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 CCDC149Q6ZUS6 474 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 FAM156AQ8NDB6 213 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 FLAD1Q8NFF5 587 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 ELAC2Q9BQ52 826 aaKnown RBP9.32□□□□□ -0.92
LSM1-202ENST00000520286 TMEM60Q9H2L4 133 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 TAGLN3Q9UI15 199 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 WASF3Q9UPY6 502 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 IPPQ9Y573 584 aa9.32□□□□□ -0.92
LSM1-202ENST00000520286 UBXN7O94888 489 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 XPAP23025 273 aaPredicted RBP9.31□□□□□ -0.92
LSM1-202ENST00000520286 ITGB7P26010 798 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 YBX1P67809 324 aaKnown RBP9.31□□□□□ -0.92
LSM1-202ENST00000520286 SKIDA1Q1XH10 827 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 CCDC178Q5BJE1 867 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 C10orf62Q5T681 223 aaPredicted RBP9.31□□□□□ -0.92
LSM1-202ENST00000520286 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 SPICE1Q8N0Z3 855 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 MARCH10Q8NA82 808 aaPredicted RBP9.31□□□□□ -0.92
LSM1-202ENST00000520286 IL17RAQ96F46 866 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 HIST1H2AHQ96KK5 128 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 HIST1H2AJQ99878 128 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 ADI1Q9BV57 179 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 KCMF1Q9P0J7 381 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 PHTF1Q9UMS5 762 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
LSM1-202ENST00000520286 FAM227AF5H4B4 570 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 B3GALT2O43825 422 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 WASP42768 502 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 HTR3AP46098 478 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 ZNF200P98182 395 aaPredicted RBP9.3□□□□□ -0.92
LSM1-202ENST00000520286 C3orf36Q3SXR2 165 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 FYB2Q5VWT5 728 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 KLHDC10Q6PID8 442 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 BTNL9Q6UXG8 535 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 TMC6Q7Z403 805 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 MORC1Q86VD1 984 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 DTX3Q8N9I9 347 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 PARD3BQ8TEW8 1205 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 GREM2Q9H772 168 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 DLL4Q9NR61 685 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 ARHGAP20Q9P2F6 1191 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 DAAM1Q9Y4D1 1078 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
LSM1-202ENST00000520286 IFRD1O00458 451 aaPredicted RBP9.29□□□□□ -0.92
LSM1-202ENST00000520286 NRP2O60462 931 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 ALDH2P05091 517 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 MCAMP43121 646 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 ZNF280AP59817 542 aaPredicted RBP9.29□□□□□ -0.92
LSM1-202ENST00000520286 BMP8AQ7Z5Y6 402 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 GLB1L3Q8NCI6 653 aaPredicted RBP9.29□□□□□ -0.92
LSM1-202ENST00000520286 CPA5Q8WXQ8 436 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 DMRT3Q9NQL9 472 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 SCOCQ9UIL1 159 aa9.29□□□□□ -0.92
LSM1-202ENST00000520286 CUTAO60888 179 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 MYL3P08590 195 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 GSPT1P15170 499 aaKnown RBP9.28□□□□□ -0.92
LSM1-202ENST00000520286 GLRBP48167 497 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 NRG3P56975 720 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 FAM193AP78312 1265 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 IL13RA1P78552 427 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 CACNB2Q08289 660 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms