RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 APOBEC3HQ6NTF7 200 aaKnown RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 RUFY4Q6ZNE9 571 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 CACNA2D3Q8IZS8 1091 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 CCDC26Q8TAB7 109 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 SLC30A5Q8TAD4 765 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 TATDN2Q93075 761 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 BORCS6Q96GS4 357 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 CALR3Q96L12 384 aaKnown RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 MYH11P35749 1972 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 CFBP00751 764 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 DRD4P21917 467 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 SCTRP47872 440 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 CYB5D1Q6P9G0 228 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 NSMFQ6X4W1 530 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 JAMLQ86YT9 394 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 WDR18Q9BV38 432 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 ZDHHC18Q9NUE0 388 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 BZW2Q9Y6E2 419 aaKnown RBP13.98□□□□□ -0.17
PHF3-212ENST00000515594 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
PHF3-212ENST00000515594 F5H6K3 240 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 MMEP08473 750 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 MAP2K2P36507 400 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 KLRC3Q07444 240 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 DDR1Q08345 913 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 MESDQ14696 234 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 FAM133BQ5BKY9 247 aaKnown RBP13.98□□□□□ -0.17
PHF3-212ENST00000515594 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
PHF3-212ENST00000515594 ZDHHC24Q6UX98 284 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 CRYGNQ8WXF5 182 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 TBC1D31Q96DN5 1066 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 PRMT1Q99873 361 aaKnown RBP13.98□□□□□ -0.17
PHF3-212ENST00000515594 ADAM7Q9H2U9 754 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 DAAM1Q9Y4D1 1078 aa13.98□□□□□ -0.17
PHF3-212ENST00000515594 TMEM150BA6NC51 233 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 CCDC188H7C350 402 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 GYS1P13807 737 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 RPL21P46778 160 aaKnown RBP13.97□□□□□ -0.17
PHF3-212ENST00000515594 FOXR2Q6PJQ5 311 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 ARHGEF19Q8IW93 802 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 SLF2Q8IX21 1173 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
PHF3-212ENST00000515594 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
PHF3-212ENST00000515594 PPATQ06203 517 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 BIRC3Q13489 604 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 CERKLQ49MI3 558 aaPredicted RBP13.97□□□□□ -0.17
PHF3-212ENST00000515594 DAB2IPQ5VWQ8 1189 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 PWWP2AQ96N64 755 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 XPO6Q96QU8 1125 aaKnown RBP13.97□□□□□ -0.17
PHF3-212ENST00000515594 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 CTTNBP2NLQ9P2B4 639 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 ALG6Q9Y672 507 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 RPTORQ8N122 1335 aa13.97□□□□□ -0.17
PHF3-212ENST00000515594 NDUFB10O96000 172 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 TNFAIP3P21580 790 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 SMTNP53814 917 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 PMS2P54278 862 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 PTENP60484 403 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 ICA1Q05084 483 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 RRP1BQ14684 758 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 ZYXQ15942 572 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 C10orf76Q5T2E6 689 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 CCDC174Q6PII3 467 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 ERMNQ8TAM6 284 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 ELAC2Q9BQ52 826 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 ERP44Q9BS26 406 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 FOCADQ5VW36 1801 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 A6NNZ2 444 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 CES2O00748 559 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 SLITRK3O94933 977 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 FERP16591 822 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 NT5C2P49902 561 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 TUBB8Q3ZCM7 444 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 CRY2Q49AN0 593 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 C2CD6Q53TS8 623 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 GKAP1Q5VSY0 366 aaPredicted RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 DUPD1Q68J44 220 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 YTHDF3Q7Z739 585 aaKnown RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 FBXO11Q86XK2 927 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 PRELID2Q8N945 189 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 MYCBPQ99417 103 aaPredicted RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 FAM118BQ9BPY3 351 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.17
PHF3-212ENST00000515594 CTNNAL1Q9UBT7 734 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 KIF13BQ9NQT8 1826 aa13.96□□□□□ -0.17
PHF3-212ENST00000515594 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.18
PHF3-212ENST00000515594 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.18
PHF3-212ENST00000515594 HLA-DOAP06340 250 aa13.96□□□□□ -0.18
PHF3-212ENST00000515594 CYP3A7P24462 503 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms