RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 MYO6Q9UM54 1294 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 EXOC7Q9UPT5 735 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 SLC45A1Q9Y2W3 748 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 SOCS7O14512 581 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 OATP04181 439 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 PGK2P07205 417 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 ACTN1P12814 892 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 FMO5P49326 533 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 VAV2P52735 878 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 NCBP1Q09161 790 aaKnown RBP16.33■□□□□ 0.21
VCAN-211ENST00000513984 BFSP1Q12934 665 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 SPA17Q15506 151 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 SLC9C1Q4G0N8 1177 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 SLC35F6Q8N357 371 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 MORC4Q8TE76 937 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 TBX20Q9UMR3 447 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 MRFAP1Q9Y605 127 aa16.33■□□□□ 0.21
VCAN-211ENST00000513984 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 KRT86O43790 486 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 MCCD1P59942 119 aaPredicted RBP16.33■□□□□ 0.2
VCAN-211ENST00000513984 FKBP1BP68106 108 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 CCDC122Q5T0U0 273 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 METTL7BQ6UX53 244 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
VCAN-211ENST00000513984 AFAP1L1Q8TED9 768 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 DEF6Q9H4E7 631 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 TRIM10Q9UDY6 481 aa16.33■□□□□ 0.2
VCAN-211ENST00000513984 RCCD1A6NED2 376 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 TISP43B9A030 160 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 CETPP11597 493 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 CYP27A1Q02318 531 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 ZNF710Q8N1W2 664 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 XXYLT1Q8NBI6 393 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 KCNN1Q92952 543 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 PCYT2Q99447 389 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 NIFKQ9BYG3 293 aaKnown RBP16.32■□□□□ 0.2
VCAN-211ENST00000513984 TSGA10Q9BZW7 698 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
VCAN-211ENST00000513984 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 DENND3A2RUS2 1198 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 AKR1B10O60218 316 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 GGPS1O95749 300 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 KRT13P13646 458 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 ABCD1P33897 745 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 SOX10P56693 466 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 EMC2Q15006 297 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 TDRD12Q587J7 1177 aaKnown RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 PCIF1Q9H4Z3 704 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 DHX33Q9H6R0 707 aaKnown RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 ADGRA3Q8IWK6 1321 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 H0YCG3 227 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 TRIM49P0CI25 452 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 TRIM49CP0CI26 452 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 CYP2C8P10632 490 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 GTF2A2P52657 109 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 JAM2P57087 298 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 TUBB2AQ13885 445 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 ASIC2Q16515 512 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 CBWD6Q4V339 395 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 CBWD3Q5JTY5 395 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 CBWD5Q5RIA9 395 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 FAM160B1Q5W0V3 765 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 KCNG1Q9UIX4 513 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
VCAN-211ENST00000513984 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
VCAN-211ENST00000513984 ARIH2O95376 493 aa16.3■□□□□ 0.2
VCAN-211ENST00000513984 ADSSP30520 456 aa16.3■□□□□ 0.2
VCAN-211ENST00000513984 POLGP54098 1239 aaPredicted RBP16.3■□□□□ 0.2
VCAN-211ENST00000513984 MYL7Q01449 175 aa16.3■□□□□ 0.2
VCAN-211ENST00000513984 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
VCAN-211ENST00000513984 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms