RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CYP4F22Q6NT55 531 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ARMCX5Q6P1M9 558 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 EDEM3Q9BZQ6 932 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 MYH11P35749 1972 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
SCLT1-209ENST00000511426 STX10O60499 249 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 LGALS2P05162 132 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 APLP1P51693 650 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 CCZ1BP86790 482 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
SCLT1-209ENST00000511426 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 COPS5Q92905 334 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 SH2D3AQ9BRG2 576 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
SCLT1-209ENST00000511426 MCM3APO60318 1980 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 SLC16A4O15374 487 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 MAGEB2O15479 319 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 MFAP3LO75121 409 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 SKILP12757 684 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 SMPD1P17405 629 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 KCNA1Q09470 495 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 ARID5BQ14865 1188 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 DGKDQ16760 1214 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 TC2NQ8N9U0 490 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 CAPNS2Q96L46 248 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 TMEM134Q9H6X4 195 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
SCLT1-209ENST00000511426 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 GTPBP10A4D1E9 387 aaKnown RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 ASAP2O43150 1006 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 GYPCP04921 128 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 FECHP22830 423 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 EFNA5P52803 228 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 LACTBP83111 547 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 TRMT1LQ7Z2T5 733 aaKnown RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 POLD4Q9HCU8 107 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 TRPC6Q9Y210 931 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 GNEQ9Y223 722 aaKnown RBP16.66■□□□□ 0.26
SCLT1-209ENST00000511426 DAAM1Q9Y4D1 1078 aa16.66■□□□□ 0.26
SCLT1-209ENST00000511426 A6NJR5 290 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 AKAP3O75969 853 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 PIGRP01833 764 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 MMP3P08254 477 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 MAP2K2P36507 400 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 KIF22Q14807 665 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 INTS8Q75QN2 995 aaKnown RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 USP37Q86T82 979 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 FAM186BQ8IYM0 893 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 ZNF397Q8NF99 534 aaPredicted RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 DEPTORQ8TB45 409 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 C2orf40Q9H1Z8 148 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 CAPN11Q9UMQ6 739 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 CCP110O43303 1012 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 TRIM21P19474 475 aaKnown RBP16.65■□□□□ 0.26
SCLT1-209ENST00000511426 GARTP22102 1010 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 GLRA2P23416 452 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 RBL2Q08999 1139 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 LRMPQ12912 555 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 STRN3Q13033 797 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 SYCP1Q15431 976 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 TRIM50Q86XT4 487 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 XXYLT1Q8NBI6 393 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 BSNDQ8WZ55 320 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 KIAA1586Q9HCI6 787 aa16.65■□□□□ 0.26
SCLT1-209ENST00000511426 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
SCLT1-209ENST00000511426 ZBTB42B2RXF5 422 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 CLIC2O15247 247 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 EXOC3O60645 756 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 CYP2B6P20813 491 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 CLCN1P35523 988 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 CPT1AP50416 773 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 TFDP1Q14186 410 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
SCLT1-209ENST00000511426 BAG1Q99933 345 aaPredicted RBP16.64■□□□□ 0.25
SCLT1-209ENST00000511426 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 NUCKS1Q9H1E3 243 aaKnown RBP16.64■□□□□ 0.25
SCLT1-209ENST00000511426 SIK3Q9Y2K2 1263 aa16.64■□□□□ 0.25
SCLT1-209ENST00000511426 LUC7L2Q9Y383 392 aaKnown RBP16.64■□□□□ 0.25
SCLT1-209ENST00000511426 RRN3P2A6NIE6 340 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms