RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PSRC1Q6PGN9 363 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 TMEM199Q8N511 208 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 INTS4Q96HW7 963 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 GUCD1Q96NT3 240 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 EIF2AK1Q9BQI3 630 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 PBX4Q9BYU1 374 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 ALG2Q9H553 416 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 AZI2Q9H6S1 392 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 PCDHA2Q9Y5H9 948 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 KAT6AQ92794 2004 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 VPS37CA5D8V6 355 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RSPH10B2B2RC85 870 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 TLL1O43897 1013 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 CAND2O75155 1236 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RSPH10BP0C881 870 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 CDC25AP30304 524 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RFC2P35250 354 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 SLC26A2P50443 739 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 ZNF484Q5JVG2 852 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 CNKSR3Q6P9H4 555 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 Q6ZNB5 142 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 KSR1Q8IVT5 923 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 IGSF22Q8N9C0 903 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 PNMA5Q96PV4 448 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 OSMRQ99650 979 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 TTC12Q9H892 705 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 ERVK-5Q9HDB9 667 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 NOC2LQ9Y3T9 749 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 SAMM50Q9Y512 469 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 TRPV2Q9Y5S1 764 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 CLIC4Q9Y696 253 aa8.08□□□□□ -1.12
TOPBP1-207ENST00000509162 RRN3P2A6NIE6 340 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 NRG2O14511 850 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 GFRA3O60609 400 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 LYPLA2O95372 231 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 PFKMP08237 780 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 FGFR4P22455 802 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 CD52P31358 61 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 DDIT3P35638 169 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 QARSP47897 775 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 GATMP50440 423 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 GPC3P51654 580 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 PSMC5P62195 406 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 ORC2Q13416 577 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 SAFBQ15424 915 aaKnown RBP eCLIP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 KIZQ2M2Z5 673 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 XKR3Q5GH77 459 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 MCTP1Q6DN14 999 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 TAF2Q6P1X5 1199 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 USP49Q70CQ1 688 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 CATSPER3Q86XQ3 398 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 C4orf19Q8IY42 314 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 CCDC155Q8N6L0 562 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 ASAP3Q8TDY4 903 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 PIGOQ8TEQ8 1089 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 HLA-CQ95604 372 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 FAM167AQ96KS9 214 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 USP28Q96RU2 1077 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 NAP1L4Q99733 375 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 DHX33Q9H6R0 707 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 MINDY3Q9H8M7 445 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 GPRC5CQ9NQ84 441 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 USTQ9Y2C2 406 aa8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-207ENST00000509162 ADGRA3Q8IWK6 1321 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 A0A087X0B3 334 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 MAFO75444 373 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 CSDE1O75534 798 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 FGBP02675 491 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 ATF7P17544 494 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 YWHABP31946 246 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 TECP42680 631 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 RARRES1P49788 294 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 GUCA2AQ02747 115 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 MAPK7Q13164 816 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 GRB10Q13322 594 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 DSC3Q14574 896 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 EMC2Q15006 297 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 TMEM119Q4V9L6 283 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 TSHZ1Q6ZSZ6 1077 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 CKAP2LQ8IYA6 745 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms