RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 AMACRQ9UHK6 382 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 A0A0A6YYK5 440 aaPredicted RBP11.87□□□□□ -0.51
LIN54-207ENST00000508171 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 ANXA13P27216 316 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 CAP2P40123 477 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 GNGT1P63211 74 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 BFSP1Q12934 665 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 DGKZQ13574 1117 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
LIN54-207ENST00000508171 OGFOD1Q8N543 542 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 LMBR1Q8WVP7 490 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 ARHGEF26Q96DR7 871 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 HES6Q96HZ4 224 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 GMLQ99445 158 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 NEUROG2Q9H2A3 272 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 ZNF277Q9NRM2 450 aaPredicted RBP11.87□□□□□ -0.51
LIN54-207ENST00000508171 SEPT11Q9NVA2 429 aaKnown RBP11.87□□□□□ -0.51
LIN54-207ENST00000508171 SUCLA2Q9P2R7 463 aaPredicted RBP11.87□□□□□ -0.51
LIN54-207ENST00000508171 INTUQ9ULD6 942 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 ZNF536O15090 1300 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
LIN54-207ENST00000508171 K7ENM7 598 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
LIN54-207ENST00000508171 MYL7Q01449 175 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 STXBP4Q6ZWJ1 553 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 MREGQ8N565 214 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■■■ 154
LIN54-207ENST00000508171 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 DHX15O43143 795 aaKnown RBP11.86□□□□□ -0.51
LIN54-207ENST00000508171 LMNB1P20700 586 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 MUTP22033 750 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 FLT3P36888 993 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
LIN54-207ENST00000508171 NAA35Q5VZE5 725 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 MIER3Q7Z3K6 550 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 CPXCR1Q8N123 301 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 RIT2Q99578 217 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
LIN54-207ENST00000508171 THAP2Q9H0W7 228 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 FEM1BQ9UK73 627 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 SAMM50Q9Y512 469 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 ZHX2Q9Y6X8 837 aa11.86□□□□□ -0.51
LIN54-207ENST00000508171 PSME4Q14997 1843 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PTGER2P43116 358 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 CCT5P48643 541 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 HSD17B4P51659 736 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 NPEPPSP55786 919 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PPARDQ03181 441 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PPP3CAQ08209 521 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 ITGB3BPQ13352 177 aaPredicted RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 PDCLQ13371 301 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PPP2R5AQ15172 486 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 DCAF12L1Q5VU92 463 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 ADAT2Q7Z6V5 191 aaKnown RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 FAM160B2Q86V87 743 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 SYCE1Q8N0S2 351 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 OR2W6PQ8NHA6 318 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 BCAS4Q8TDM0 211 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 SLC20A1Q8WUM9 679 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 UBE2TQ9NPD8 197 aaPredicted RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 COG5Q9UP83 839 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PLAAQ9Y263 795 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 COL4A5P29400 1685 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 UBE4BO95155 1302 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 EMSYQ7Z589 1322 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 EIF3HO15372 352 aaKnown RBP eCLIP11.85□□□□□ -0.51
LIN54-207ENST00000508171 TTI1O43156 1089 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 DAPK3O43293 454 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PLA2G6O60733 806 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 FGGP02679 453 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 COPB2P35606 906 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 PPATQ06203 517 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 SPP2Q13103 211 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 ARHGEF19Q8IW93 802 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 RFFLQ8WZ73 363 aa11.85□□□□□ -0.51
LIN54-207ENST00000508171 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 CHORDC1Q9UHD1 332 aaPredicted RBP11.85□□□□□ -0.51
LIN54-207ENST00000508171 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 TMEM253P0C7T8 217 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 HSD17B3P37058 310 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 HSPA9P38646 679 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 GCLMP48507 274 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 MRPS9P82933 396 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms