RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TMEM253P0C7T8 217 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 UCHL3P15374 230 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 VEGFAP15692 232 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 GAP43P17677 238 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DRD4P21917 467 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PRDX5P30044 214 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ECHS1P30084 290 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 GBP2P32456 591 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 STAT1P42224 750 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CDK8P49336 464 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SMCPP49901 116 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DNA2P51530 1060 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF131P52739 623 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SIK1P57059 783 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PTENP60484 403 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAGOHP61326 146 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MRPS25P82663 173 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DR1Q01658 176 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PTK2Q05397 1052 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DHX9Q08211 1270 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 HERC4Q5GLZ8 1057 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MOXD1Q6UVY6 613 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 STXBP4Q6ZWJ1 553 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DAAM2Q86T65 1068 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 BPHLQ86WA6 291 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 GPBP1Q86WP2 473 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 TEX11Q8IYF3 940 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 FUKQ8N0W3 1084 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 METTL13Q8N6R0 699 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 UBL4BQ8N7F7 174 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC63Q8NA47 563 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 NEK9Q8TD19 979 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 LRRC15Q8TF66 581 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF384Q8TF68 577 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CTNNBL1Q8WYA6 563 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 RFFLQ8WZ73 363 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCT6BQ92526 530 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 RAPGEF5Q92565 580 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 N4BP2L2Q92802 583 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF622Q969S3 477 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAGOHBQ96A72 148 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 DNAJC19Q96DA6 116 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 EEF2KMTQ96G04 330 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 HES6Q96HZ4 224 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SCLT1Q96NL6 688 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PIGSQ96S52 555 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 EYA3Q99504 573 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 HINFPQ9BQA5 517 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ROPN1BQ9BZX4 212 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CARD9Q9H257 536 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PABPC3Q9H361 631 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC134Q9H6E4 229 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ROPN1Q9HAT0 212 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 HOMER3Q9NSC5 361 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLAIN2Q9P270 581 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 NAGPAQ9UK23 515 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SUFUQ9UMX1 484 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PCDHA12Q9UN75 941 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 LEMD3Q9Y2U8 911 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 NCANO14594 1321 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PFASO15067 1338 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SYNGAP1Q96PV0 1343 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PLIN4Q96Q06 1357 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 C10orf71Q711Q0 1435 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLIT2O94813 1529 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 TNRC6CQ9HCJ0 1690 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC88AQ3V6T2 1871 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 FRMD3A2A2Y4 597 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L3A6NCW0 530 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L4A6NCW7 530 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZSCAN5CA6NGD5 496 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 SMIM22K7EJ46 135 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 O00370 1275 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 TBX3O15119 743 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DAPK3O43293 454 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 BUB1BO60566 1050 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CTNND1O60716 968 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 TBCAO75347 108 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 LUC7L3O95232 432 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 MMEP08473 750 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PLA2G4BP0C869 781 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 NR2F2P24468 414 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CHRNA3P32297 505 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PDE6BP35913 854 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 MMP13P45452 471 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOVP48745 357 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 TNNI2P48788 182 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PDE6CP51160 858 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CLNS1AP54105 237 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PMS2P54278 862 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 RNASE9P60153 205 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ARID5AQ03989 594 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 LRRC41Q15345 812 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZKSCAN8Q15776 578 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 UAP1Q16222 522 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 NFIL3Q16649 462 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 KNOP1Q1ED39 458 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC35G1Q2M3R5 365 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ERFEQ4G0M1 354 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms