RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SDHAP31040 664 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 ATP2C1P98194 919 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 GIMAP6Q6P9H5 292 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 NOP9Q86U38 636 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 MAGEB10Q96LZ2 347 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 AGO3Q9H9G7 860 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 SLC52A2Q9HAB3 445 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 SAE1Q9UBE0 346 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 SH3BP1Q9Y3L3 701 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 CTDP1Q9Y5B0 961 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 B3GALT1Q9Y5Z6 326 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 MRPL42Q9Y6G3 142 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 RASSF10A6NK89 507 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 ENPP3O14638 875 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 RPS6KA4O75676 772 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 RASGRP1O95267 797 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 PEX11BO96011 259 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 MAN2A2P49641 1150 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 BPIFB4P59827 614 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 IRF9Q00978 393 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 ALDH6A1Q02252 535 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 SAFB2Q14151 953 aaKnown RBP eCLIP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 MBNL2Q5VZF2 373 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 SPTY2D1Q68D10 685 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 C2orf69Q8N8R5 385 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 ZSWIM2Q8NEG5 633 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 OR5AN1Q8NGI8 311 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 GFM2Q969S9 779 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 E2F7Q96AV8 911 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 MIEF2Q96C03 454 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 RPL10LQ96L21 214 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 SLC6A15Q9H2J7 730 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 HECAQ9UBI9 543 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 MAGEL2Q9UJ55 1249 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 DENND2AQ9ULE3 1009 aa3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 RBM8AQ9Y5S9 174 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-205ENST00000506779 GOLGA6L22H0YM25 854 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 MAFO75444 373 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 KRT37O76014 449 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 SCNN1GP51170 649 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 ROM1Q03395 351 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 TCIRG1Q13488 830 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 ELAVL1Q15717 326 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 TRIM61Q5EBN2 209 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 ZC3H12BQ5HYM0 836 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 CATSPEREQ5SY80 951 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 KRT40Q6A162 431 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 Q6ZRM9 215 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 OVCH1Q7RTY7 1134 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 GSPT2Q8IYD1 628 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 ANKRD53Q8N9V6 530 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 SCARB1Q8WTV0 552 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 DLG3Q92796 817 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 FOXB1Q99853 325 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 NRDE2Q9H7Z3 1164 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 RCAN3Q9UKA8 241 aa3.9□□□□□ -1.79
TOPBP1-205ENST00000506779 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 PTGS2P35354 604 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 ADCY7P51828 1080 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 SLC6A3Q01959 620 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 ACAP1Q15027 740 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 DGKDQ16760 1214 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 TMEM177Q53S58 311 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 BRAPQ7Z569 592 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 BCL6BQ8N143 479 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 IGSF22Q8N9C0 903 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 GSTCDQ8NEC7 633 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 ARL8AQ96BM9 186 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 TCF25Q9BQ70 676 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 BOCQ9BWV1 1114 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 GPR87Q9BY21 358 aa3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 NCOA5Q9HCD5 579 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-205ENST00000506779 UBE2QL1A1L167 161 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 FAM20BO75063 409 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 NPTXRO95502 500 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 PRLP01236 227 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 RGS3P49796 1198 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 SMAD3P84022 425 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 TKFCQ3LXA3 575 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 STRIP1Q5VSL9 837 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 SLFN12LQ6IEE8 588 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 CC2D1AQ6P1N0 951 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 FAM111BQ6SJ93 734 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 RTN4RL1Q86UN2 441 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 SYNE4Q8N205 404 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 MB21D1Q8N884 522 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 SLC7A14Q8TBB6 771 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 PGBD4Q96DM1 585 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 GPHA2Q96T91 129 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 PCIF1Q9H4Z3 704 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 IL23AQ9NPF7 189 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 NCDNQ9UBB6 729 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 PACSIN3Q9UKS6 424 aa3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 TMA7Q9Y2S6 64 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-205ENST00000506779 UBA6A0AVT1 1052 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 TLDC2A0PJX2 215 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 TRAF5O00463 557 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 KCNQ2O43526 872 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 FNTBP49356 437 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms