RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KIFAP3Q92845 792 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 KCNN1Q92952 543 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 AGPAT3Q9NRZ7 376 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 NRBP2Q9NSY0 501 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 TYW1Q9NV66 732 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 DMAC2Q9NW81 257 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 ERAP1Q9NZ08 941 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 LARSQ9P2J5 1176 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 ARHGAP28Q9P2N2 729 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 CENPFP49454 3210 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 SPDYE4A6NLX3 237 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 LGALS16A8MUM7 142 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 ANKRD63C9JTQ0 380 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 H3BRB1 525 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 GPR25O00155 361 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 HAS3O00219 553 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 CLIC2O15247 247 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 DYNC1LI2O43237 492 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 HBP1O60381 514 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 PPFIA4O75335 1185 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 AKAP3O75969 853 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 F2P00734 622 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 NR3C1P04150 777 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 GJB1P08034 283 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 INSRRP14616 1297 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 ELNP15502 786 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 NR2F2P24468 414 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 MARSP56192 900 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 FKBP3Q00688 224 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 BEX3Q00994 111 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 SPAG1Q07617 926 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 CACNB2Q08289 660 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 DMP1Q13316 513 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 MARCH8Q5T0T0 291 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 MAP3K21Q5TCX8 1036 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 ARMCX5Q6P1M9 558 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TMC6Q7Z403 805 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TRIM59Q8IWR1 403 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 LRRC71Q8N4P6 559 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 PPP1R13LQ8WUF5 828 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TMEM174Q8WUU8 243 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 ZNF830Q96NB3 372 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TSG101Q99816 390 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TUBGCP2Q9BSJ2 902 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 UPF3AQ9H1J1 476 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 VPS16Q9H269 839 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 C17orf75Q9HAS0 396 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 SRRDQ9UH36 339 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 FAM184BQ9ULE4 1060 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TBX20Q9UMR3 447 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 TRPC6Q9Y210 931 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 USP20Q9Y2K6 914 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 PPME1Q9Y570 386 aa7.59□□□□□ -1.19
TOPBP1-203ENST00000503464 COL1A2P08123 1366 aa7.59□□□□□ -1.2
TOPBP1-203ENST00000503464 DENND3A2RUS2 1198 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 TTLL13PA6NNM8 815 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC169A6NNP5 214 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 RNF225M0QZC1 329 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CBFA2T2O43439 604 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 KIF20AO95235 890 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 AKR1A1P14550 325 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CCND3P30281 292 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ADSSP30520 456 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 NAMPTP43490 491 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 KLK7P49862 253 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CLCN3P51790 818 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 NKX3-2P78367 333 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA8FQ08AF8 430 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA8DPQ0D2H9 430 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 LRMPQ12912 555 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ADAM9Q13443 819 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ALCAMQ13740 583 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 DGKDQ16760 1214 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ZNF484Q5JVG2 852 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CDCA2Q69YH5 1023 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC186Q7Z3E2 898 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 FILIP1Q7Z7B0 1213 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 C12orf56Q8IXR9 622 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC155Q8N6L0 562 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CACTINQ8WUQ7 758 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ZNF296Q8WUU4 475 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 PRPF31Q8WWY3 499 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 SLC7A3Q8WY07 619 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 HVCN1Q96D96 273 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ACCSQ96QU6 501 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CBWD1Q9BRT8 395 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 HAPLN2Q9GZV7 340 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC113Q9H0I3 377 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 GBP3Q9H0R5 595 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 KMT5AQ9NQR1 393 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 SAGE1Q9NXZ1 904 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 Q9Y3F1 56 aa7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 PCDHB13Q9Y5F0 798 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms