RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 OSMRQ99650 979 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 CUEDC2Q9H467 287 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 ELAC1Q9H777 363 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
UBE2D3-212ENST00000502563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 USO1O60763 962 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 AMHP03971 560 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 CD52P31358 61 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 ABCD1P33897 745 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 NAMPTP43490 491 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 PHKA2P46019 1235 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 FXR1P51114 621 aaKnown RBP eCLIP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 FAM189BP81408 668 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 HTRA4P83105 476 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 GRIN1Q05586 938 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 DSC3Q14574 896 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 FAM187BQ17R55 369 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 AXDND1Q5T1B0 1012 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 RINT1Q6NUQ1 792 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 CCDC73Q6ZRK6 1079 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 CCDC51Q96ER9 411 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 SH2D3AQ9BRG2 576 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 NTPCRQ9BSD7 190 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 OSBPL7Q9BZF2 842 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 C2orf40Q9H1Z8 148 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 MAGEF1Q9HAY2 307 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 RGS18Q9NS28 235 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 BLOC1S4Q9NUP1 217 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 DACT1Q9NYF0 836 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 ST3GAL5Q9UNP4 418 aa11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-212ENST00000502563 A0A087WZ62 844 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 E9PMD0 336 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 ENPP3O14638 875 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 GLRA2P23416 452 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 ZNF131P52739 623 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 EFNA5P52803 228 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 TMEM62Q0P6H9 643 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 TCTN1Q2MV58 587 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 ADALQ6DHV7 355 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 SLC24A5Q71RS6 500 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 HERC6Q8IVU3 1022 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 SPIRE2Q8WWL2 714 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 LARP4BQ92615 738 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 RAD54LQ92698 747 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 FDXACB1Q9BRP7 624 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 TMX1Q9H3N1 280 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 RC3H2Q9HBD1 1191 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 ZMYM2Q9UBW7 1377 aa11.89□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 C9IYK1 514 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 H0YCG3 227 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 ZNF623O75123 536 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 PLA2G4BP0C869 781 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 STAG3L1P0CL83 205 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 SKIP12755 728 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 PLCG1P19174 1290 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 RAB27AP51159 221 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 MAPK7Q13164 816 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 CAPSQ13938 189 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 KARSQ15046 597 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 NAALADL2Q58DX5 795 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 CNNM4Q6P4Q7 775 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 NPAS4Q8IUM7 802 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 ASAP3Q8TDY4 903 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 LINC01599Q8WXQ3 324 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 EPSTI1Q96J88 318 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 NLRP4Q96MN2 994 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 RAD9AQ99638 391 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 PBX4Q9BYU1 374 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 FZD8Q9H461 694 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 PRMT7Q9NVM4 692 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 GINS2Q9Y248 185 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 PTPRSQ13332 1948 aa11.88□□□□□ -0.51
UBE2D3-212ENST00000502563 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms