RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 SLC35G2Q8TBE7 412 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 LCMT1Q9UIC8 334 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 KRIT1O00522 736 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
CDCA7-208ENST00000496441 TNFAIP3P21580 790 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 SOX5P35711 763 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 EPHB4P54760 987 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 PDE4CQ08493 712 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 BFSP1Q12934 665 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 TKFCQ3LXA3 575 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 XKR9Q5GH70 373 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 AADACL2Q6P093 401 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
CDCA7-208ENST00000496441 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
CDCA7-208ENST00000496441 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
CDCA7-208ENST00000496441 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 THAP2Q9H0W7 228 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
CDCA7-208ENST00000496441 PEX10O60683 326 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 HSF2BPO75031 334 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 ICAM1P05362 532 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 KRT13P13646 458 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 JAM2P57087 298 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 MAPK7Q13164 816 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 TNIP1Q15025 636 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 STXBP4Q6ZWJ1 553 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 MAATS1Q7Z4T9 603 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 FAM76AQ8TAV0 307 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 JDP2Q8WYK2 163 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 ARHGEF26Q96DR7 871 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 BACH1O14867 736 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 YWHABP31946 246 aaKnown RBP12.53□□□□□ -0.4
CDCA7-208ENST00000496441 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
CDCA7-208ENST00000496441 EIF3DO15371 548 aaKnown RBP eCLIP12.52□□□□□ -0.4
CDCA7-208ENST00000496441 FERP16591 822 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 KCNA3P22001 575 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.4
CDCA7-208ENST00000496441 RARRES1P49788 294 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.4
CDCA7-208ENST00000496441 TRAF1Q13077 416 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.4
CDCA7-208ENST00000496441 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.4
CDCA7-208ENST00000496441 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 NR2E1Q9Y466 385 aa12.52□□□□□ -0.4
CDCA7-208ENST00000496441 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 ZEB2O60315 1214 aa12.52□□□□□ -0.41
CDCA7-208ENST00000496441 FGGP02679 453 aa12.52□□□□□ -0.41
CDCA7-208ENST00000496441 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
CDCA7-208ENST00000496441 LRRC31Q6UY01 552 aa12.52□□□□□ -0.41
CDCA7-208ENST00000496441 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
CDCA7-208ENST00000496441 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDCA7-208ENST00000496441 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 DLATP10515 647 aaKnown RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 PTGER2P43116 358 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 TNNC1P63316 161 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 ATG4CQ96DT6 458 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 STK33Q9BYT3 514 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 TOPORSQ9NS56 1045 aaPredicted RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 TRIM66O15016 1216 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 TTI1O43156 1089 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 VCAM1P19320 739 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 VAMP7P51809 220 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
CDCA7-208ENST00000496441 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
CDCA7-208ENST00000496441 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms