RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 KCNJ12Q14500 433 aa19.29■□□□□ 0.68
PSMB4-206ENST00000495288 NTPCRQ9BSD7 190 aaKnown RBP19.29■□□□□ 0.68
PSMB4-206ENST00000495288 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
PSMB4-206ENST00000495288 SETD4Q9NVD3 440 aa19.29■□□□□ 0.68
PSMB4-206ENST00000495288 ARID2Q68CP9 1835 aa19.29■□□□□ 0.68
PSMB4-206ENST00000495288 COL1A2P08123 1366 aa19.29■□□□□ 0.68
PSMB4-206ENST00000495288 IGKV6-21A0A0C4DH24 114 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 RRN3P2A6NIE6 340 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 C22orf31O95567 290 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 F2P00734 622 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 SRGAP2CP0DJJ0 459 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 SMIM10L2AP0DMW4 78 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 SMIM10L2BP0DMW5 78 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 UBASH3AP57075 661 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 GTF2BQ00403 316 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 FKBP3Q00688 224 aaKnown RBP19.28■□□□□ 0.68
PSMB4-206ENST00000495288 SPAG1Q07617 926 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 MKRN4PQ13434 485 aaPredicted RBP19.28■□□□□ 0.68
PSMB4-206ENST00000495288 ZCWPW2Q504Y3 356 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 MAP3K21Q5TCX8 1036 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 MTHFD1LQ6UB35 978 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 FAM114A1Q8IWE2 563 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 DRC7Q8IY82 874 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 TMEM161BQ8NDZ6 487 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 PSPC1Q8WXF1 523 aaKnown RBP19.28■□□□□ 0.68
PSMB4-206ENST00000495288 MTG1Q9BT17 334 aaPredicted RBP19.28■□□□□ 0.68
PSMB4-206ENST00000495288 STRA6Q9BX79 667 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 IKZF4Q9H2S9 585 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 ST6GALNAC4Q9H4F1 302 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 TMEM206Q9H813 350 aa19.28■□□□□ 0.68
PSMB4-206ENST00000495288 TYW1Q9NV66 732 aaKnown RBP19.28■□□□□ 0.68
PSMB4-206ENST00000495288 H0YCG3 227 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 CLIC2O15247 247 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 CBFA2T2O43439 604 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 PPP1R37O75864 691 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 NAMPTP43490 491 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 CLCN3P51790 818 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 LAMTOR4Q0VGL1 99 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 ADAM9Q13443 819 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 TCP11X2Q5H9J9 407 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 FOXR2Q6PJQ5 311 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 HS2ST1Q7LGA3 356 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 IRF2BP1Q8IU81 584 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 RHPN2Q8IUC4 686 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 DNAJC5GQ8N7S2 189 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 KATNAL1Q9BW62 490 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 XPO4Q9C0E2 1151 aaKnown RBP19.27■□□□□ 0.68
PSMB4-206ENST00000495288 HMX1Q9NP08 348 aaPredicted RBP19.27■□□□□ 0.68
PSMB4-206ENST00000495288 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.68
PSMB4-206ENST00000495288 TBX20Q9UMR3 447 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 EXOC7Q9UPT5 735 aa19.27■□□□□ 0.68
PSMB4-206ENST00000495288 CASP8AP2Q9UKL3 1982 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 CETN3O15182 167 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 TGFB1I1O43294 461 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 RPL13P26373 211 aaKnown RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 TMOD1P28289 359 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 MTIF2P46199 727 aaKnown RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 MXD4Q14582 209 aaPredicted RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 EDRF1Q3B7T1 1238 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 CXCL17Q6UXB2 119 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 C7orf31Q8N865 590 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 SH3TC2Q8TF17 1288 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 HVCN1Q96D96 273 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 CNOT6LQ96LI5 555 aaKnown RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 NAP1L5Q96NT1 182 aaPredicted RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 GBP3Q9H0R5 595 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 VPS16Q9H269 839 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 TAB2Q9NYJ8 693 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 LIMA1Q9UHB6 759 aaKnown RBP19.26■□□□□ 0.67
PSMB4-206ENST00000495288 TRAF3IP3Q9Y228 551 aa19.26■□□□□ 0.67
PSMB4-206ENST00000495288 MYH11P35749 1972 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 K7ERI5 159 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 HAS3O00219 553 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 NR3C1P04150 777 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 NR2F2P24468 414 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 EEF1GP26641 437 aaKnown RBP19.25■□□□□ 0.67
PSMB4-206ENST00000495288 CAPSQ13938 189 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 TFDP1Q14186 410 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 KRT31Q15323 416 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 KCNA10Q16322 511 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 CCDC40Q4G0X9 1142 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 FILIP1LQ4L180 1135 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 FILIP1Q7Z7B0 1213 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 GOLGA5Q8TBA6 731 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 ZNF668Q96K58 619 aaPredicted RBP19.25■□□□□ 0.67
PSMB4-206ENST00000495288 CEP63Q96MT8 703 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 AKT3Q9Y243 479 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 PTPN22Q9Y2R2 807 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 ADGRA3Q8IWK6 1321 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
PSMB4-206ENST00000495288 ZMYM2Q9UBW7 1377 aa19.24■□□□□ 0.67
PSMB4-206ENST00000495288 PES1O00541 588 aaKnown RBP19.24■□□□□ 0.67
PSMB4-206ENST00000495288 ASAP2O43150 1006 aa19.24■□□□□ 0.67
PSMB4-206ENST00000495288 ADAMTS4O75173 837 aa19.24■□□□□ 0.67
PSMB4-206ENST00000495288 TPM2P07951 284 aa19.24■□□□□ 0.67
PSMB4-206ENST00000495288 GJB1P08034 283 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms