RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TAF1BQ53T94 588 aaPredicted RBP20.46■□□□□ 0.87
COL27A1-207ENST00000494090 TRIM4Q9C037 500 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
COL27A1-207ENST00000494090 WDR91A4D1P6 747 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 TAC1P20366 129 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 SCARF1Q14162 830 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 PLA2G12BQ9BX93 195 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 ZWILCHQ9H900 591 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 ADGRB3O60242 1522 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 PP2D1A8MPX8 630 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 MYO1CO00159 1063 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 CLGNO14967 610 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 GSTA4O15217 222 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 KRT37O76014 449 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 TAF11Q15544 211 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 BEST2Q8NFU1 509 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 MORC4Q8TE76 937 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 PSPC1Q8WXF1 523 aaKnown RBP20.46■□□□□ 0.87
COL27A1-207ENST00000494090 DYDC2Q96IM9 177 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 ASNSD1Q9NWL6 643 aa20.46■□□□□ 0.87
COL27A1-207ENST00000494090 FRMD3A2A2Y4 597 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 MARK3P27448 753 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 ANGPTL2Q9UKU9 493 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 SMIM24O75264 130 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 SKIP12755 728 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 TBXAS1P24557 533 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 PMS2P54278 862 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 TSPY1Q01534 308 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 NAA30Q147X3 362 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 TADA2BQ86TJ2 420 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 THNSL1Q8IYQ7 743 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 BANK1Q8NDB2 785 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 HDAC6Q9UBN7 1215 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 NCK2O43639 380 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 HUS1O60921 280 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 ZNF189O75820 626 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 SLC27A3Q5K4L6 730 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 SERPINI1Q99574 410 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 OVOS2A0A0G2JMS6 1433 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 OVOS2A0A0J9YW53 1432 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 OVOS2Q6IE36 1432 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 NFX1Q12986 1120 aaKnown RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 PDXDC1Q6P996 788 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 RSBN1LQ6PCB5 846 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 RUBCNQ92622 972 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 PPWD1Q96BP3 646 aaKnown RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 NGRNQ9NPE2 291 aaKnown RBP20.45■□□□□ 0.86
COL27A1-207ENST00000494090 PPME1Q9Y570 386 aa20.45■□□□□ 0.86
COL27A1-207ENST00000494090 ZNF609O15014 1411 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 MAP3K7O43318 606 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 SLC4A1P02730 911 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 ZNF18P17022 549 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 CHRNA3P32297 505 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 RECQLP46063 649 aaPredicted RBP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 GSPT2Q8IYD1 628 aaKnown RBP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 INTS2Q9H0H0 1204 aaKnown RBP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 FGFR1OP2Q9NVK5 253 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 TPX2Q9ULW0 747 aaKnown RBP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 USP11P51784 963 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 TTLL4Q14679 1199 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 KCNF1Q9H3M0 494 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 A0A1B0GTH6 734 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 FAM187AA6NFU0 413 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 PEX19P40855 299 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 INPP1P49441 399 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 NEDD1Q8NHV4 660 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 ECE2O60344 883 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 VAMP7P51809 220 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 DRAP1Q14919 205 aaPredicted RBP20.44■□□□□ 0.86
COL27A1-207ENST00000494090 FAM96AQ9H5X1 160 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 SLITRK6Q9H5Y7 841 aa20.44■□□□□ 0.86
COL27A1-207ENST00000494090 PHEXP78562 749 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 TBC1D1Q86TI0 1168 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 ADGRF4Q8IZF3 695 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 DPF2Q92785 391 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 FGD4Q96M96 766 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 CHD1O14646 1710 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 PPP2R2AP63151 447 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 LRRC31Q6UY01 552 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 NBPF15Q8N660 670 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 HSPH1Q92598 858 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 FAF2Q96CS3 445 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 ATP1A1P05023 1023 aaKnown RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 P4HBP07237 508 aaKnown RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 MAGOHP61326 146 aaKnown RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 CCZ1BP86790 482 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 CCZ1P86791 482 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 KYAT1Q16773 422 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 ZNF699Q32M78 642 aa20.43■□□□□ 0.86
COL27A1-207ENST00000494090 RNF219Q5W0B1 726 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 SNRNP48Q6IEG0 339 aaKnown RBP20.43■□□□□ 0.86
COL27A1-207ENST00000494090 ELMOD1Q8N336 334 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms