RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ITGB1P05556 798 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 COL9A1P20849 921 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 FGFR4P22455 802 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 HYAL1Q12794 435 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 DRP2Q13474 957 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 BTG3Q14201 252 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-234ENST00000493923 DSC3Q14574 896 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 COL19A1Q14993 1142 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 EARS2Q5JPH6 523 aaKnown RBP9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ZNF484Q5JVG2 852 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 IER5Q5VY09 327 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 FAM160B1Q5W0V3 765 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ZNF746Q6NUN9 644 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-234ENST00000493923 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 POTEGQ6S5H5 508 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 LRRC71Q8N4P6 559 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 NEK9Q8TD19 979 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 SLC5A5Q92911 643 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 OSMRQ99650 979 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 GLT8D2Q9H1C3 349 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 C11orf16Q9NQ32 467 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ST3GAL5Q9UNP4 418 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-234ENST00000493923 FAM86C2PA6NEL3 165 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 C9IYK1 514 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 SLC37A4O43826 429 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 NEMFO60524 1076 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 CSDE1O75534 798 aaKnown RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 PSMD10O75832 226 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 LARGE1O95461 756 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 PSMA5P28066 241 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 NOP2P46087 812 aaKnown RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 NLRP5P59047 1200 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 SCRN1Q12765 414 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 NFX1Q12986 1120 aaKnown RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 PAK2Q13177 524 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 DHX8Q14562 1220 aaKnown RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 CLUL1Q15846 466 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 LEXMQ3ZCV2 418 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 B3GNT9Q6UX72 402 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC91Q7Z6B0 441 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 NPAS4Q8IUM7 802 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 FAM178BQ8IXR5 827 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 SPPL3Q8TCT6 385 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 OXER1Q8TDS5 423 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 MBOAT7Q96N66 472 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 SAMD11Q96NU1 681 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 CEP89Q96ST8 783 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 ADAM2Q99965 735 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 TM6SF1Q9BZW5 370 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 ADAMTS10Q9H324 1103 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 DISC1Q9NRI5 854 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 TBC1D22BQ9NU19 505 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 ARGLU1Q9NWB6 273 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-234ENST00000493923 RSPH14Q9UHP6 348 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 PCDHA10Q9Y5I2 948 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 CYP46A1Q9Y6A2 500 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 SQORQ9Y6N5 450 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 COL1A2P08123 1366 aa9.12□□□□□ -0.95
HDAC6-234ENST00000493923 GRXCR2A6NFK2 248 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 EML1O00423 815 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 TBX10O75333 385 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 RPS6KA5O75582 802 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 PSAPP07602 524 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 FGFR1P11362 822 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 GNA11P29992 359 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 SARSP49591 514 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 SLC26A2P50443 739 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 SETQ01105 290 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 AKAP17AQ02040 695 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 PRKCEQ02156 737 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 SSRP1Q08945 709 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 INF2Q27J81 1249 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 AAK1Q2M2I8 961 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CMTR2Q8IYT2 770 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 BLIDQ8IZY5 108 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 NME8Q8N427 588 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 METTL13Q8N6R0 699 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 KLHL23Q8NBE8 558 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 ETNPPLQ8TBG4 499 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC12Q8WUD4 166 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 ZNF274Q96GC6 653 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 TACO1Q9BSH4 297 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 DEF6Q9H4E7 631 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 NSUN3Q9H649 340 aaKnown RBP9.11□□□□□ -0.95
HDAC6-234ENST00000493923 IGFLR1Q9H665 355 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms