RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PFKMP08237 780 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 EDNRBP24530 442 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 DDIT3P35638 169 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 PRIM2P49643 509 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 LGALS4P56470 323 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 TNFAIP2Q03169 654 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 MALLQ13021 153 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 THEMIS2Q5TEJ8 643 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 KLHDC10Q6PID8 442 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 MAEAQ7L5Y9 396 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 KANSL1Q7Z3B3 1105 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 DAAM2Q86T65 1068 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 RTN4RL1Q86UN2 441 aaPredicted RBP5.41□□□□□ -1.54
GTF3A-208ENST00000493903 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 TTLL11Q8NHH1 800 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 TSPEARQ8WU66 669 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 ASB15Q8WXK1 588 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 CCT6BQ92526 530 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 PHKBQ93100 1093 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 HHIPL1Q96JK4 782 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 GBP4Q96PP9 640 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 TUBGCP5Q96RT8 1024 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 FOXB1Q99853 325 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 MYL10Q9BUA6 226 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 ZHX3Q9H4I2 956 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 AGO4Q9HCK5 861 aaKnown RBP5.41□□□□□ -1.54
GTF3A-208ENST00000493903 DCP1AQ9NPI6 582 aaPredicted RBP5.41□□□□□ -1.54
GTF3A-208ENST00000493903 MYOTQ9UBF9 498 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 CCDC39Q9UFE4 941 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 PLAGL2Q9UPG8 496 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 STXBP5LQ9Y2K9 1186 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 TELO2Q9Y4R8 837 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 SCINQ9Y6U3 715 aa5.41□□□□□ -1.54
GTF3A-208ENST00000493903 A0A088AWK7 358 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 RHPN2P1A8MT19 583 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PRRT4C9JH25 899 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 MAFGO15525 162 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PRNPP04156 253 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 RPLP2P05387 115 aaKnown RBP5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PIK3CBP42338 1070 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 CASP5P51878 434 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 TRIM14Q14142 442 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.54
GTF3A-208ENST00000493903 IZUMO3Q5VZ72 239 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PPP4R3AQ6IN85 833 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 TLDC1Q6P9B6 456 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 SKAP1Q86WV1 359 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 DCP2Q8IU60 420 aaKnown RBP5.4□□□□□ -1.54
GTF3A-208ENST00000493903 CILP2Q8IUL8 1156 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 OR14C36Q8NHC7 312 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 NETO1Q8TDF5 533 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 LINC01599Q8WXQ3 324 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 SEC14L1Q92503 715 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 APIPQ96GX9 242 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 CDK5RAP3Q96JB5 506 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 TBATAQ96M53 351 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 G6PC3Q9BUM1 346 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 APOL5Q9BWW9 433 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 LRRC27Q9C0I9 530 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 STARD7Q9NQZ5 370 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 PDLIM7Q9NR12 457 aa5.4□□□□□ -1.54
GTF3A-208ENST00000493903 C9orf78Q9NZ63 289 aaPredicted RBP5.4□□□□□ -1.54
GTF3A-208ENST00000493903 ANGEL1Q9UNK9 670 aaKnown RBP5.4□□□□□ -1.54
GTF3A-208ENST00000493903 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 WNT11O96014 354 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 PRLP01236 227 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 MMEP08473 750 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 MYF5P13349 255 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 PPM1AP35813 382 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 CASP2P42575 452 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 GPR15P49685 360 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
GTF3A-208ENST00000493903 ROM1Q03395 351 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 ADCY2Q08462 1091 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 TRIM25Q14258 630 aaKnown RBP5.39□□□□□ -1.55
GTF3A-208ENST00000493903 MYBPC3Q14896 1274 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 ADRM1Q16186 407 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 CCDC178Q5BJE1 867 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 GPR155Q7Z3F1 870 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 CABP7Q86V35 215 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 LYSMD2Q8IV50 215 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 KLHDC4Q8TBB5 520 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 NRG4Q8WWG1 115 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 TRIM63Q969Q1 353 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 HDAC10Q969S8 669 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
GTF3A-208ENST00000493903 VPS11Q9H270 941 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 AS3MTQ9HBK9 375 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 ATP13A1Q9HD20 1204 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 PRSS50Q9UI38 385 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 DENND2AQ9ULE3 1009 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 WASF3Q9UPY6 502 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 PCDHB4Q9Y5E5 795 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 CDY2AQ9Y6F7 541 aa5.39□□□□□ -1.55
GTF3A-208ENST00000493903 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms