RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 EIF3DO15371 548 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 PRLRP16471 622 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 VCAM1P19320 739 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 RARRES1P49788 294 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 BFSP1Q12934 665 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 CPNE8Q86YQ8 564 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 TAF4BQ92750 862 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 PSMD1Q99460 953 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-220ENST00000492280 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
HMGN1-220ENST00000492280 COL2A1P02458 1487 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 FOXN3O00409 490 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 CCNE2O96020 404 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 STAT1P42224 750 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 HSD17B4P51659 736 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 ZNF211Q13398 564 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 PRPF4BQ13523 1007 aaKnown RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 CCDC127Q96BQ5 260 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 TMEM110-MUSTN1A8MSY1 372 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 SOX5P35711 763 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 FAM102BQ5T8I3 360 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 TEPSINQ96N21 525 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 TRIM31Q9BZY9 425 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 THAP2Q9H0W7 228 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 RPAP3Q9H6T3 665 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 LCMT1Q9UIC8 334 aa13.54□□□□□ -0.24
HMGN1-220ENST00000492280 NOC2LQ9Y3T9 749 aaKnown RBP13.54□□□□□ -0.24
HMGN1-220ENST00000492280 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 TUBBP07437 444 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 ADRB2P07550 413 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 MCM3P25205 808 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 ACBD3Q9H3P7 528 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-220ENST00000492280 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 KIAA1217Q5T5P2 1943 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 CCDC169A6NNP5 214 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 SLC26A4O43511 780 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 PPP1R37O75864 691 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 PRKCIP41743 596 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 PGM5Q15124 567 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 NEUROG2Q9H2A3 272 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 MED4Q9NPJ6 270 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 APEX2Q9UBZ4 518 aa13.53□□□□□ -0.24
HMGN1-220ENST00000492280 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.24
HMGN1-220ENST00000492280 TTMPQ5BVD1 217 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 XKR9Q5GH70 373 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.24
HMGN1-220ENST00000492280 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 DMAC2Q9NW81 257 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 AMACRQ9UHK6 382 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 COG5Q9UP83 839 aa13.52□□□□□ -0.24
HMGN1-220ENST00000492280 GOLGA6CA6NDK9 693 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 ANKRD63C9JTQ0 380 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 GOLGA6DP0CG33 693 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-220ENST00000492280 MARCKSL1P49006 195 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 EPHB4P54760 987 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 FAM83AQ86UY5 434 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 OR2W6PQ8NHA6 318 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 SLC38A10Q9HBR0 1119 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 GOLGA6AQ9NYA3 693 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
HMGN1-220ENST00000492280 CTDP1Q9Y5B0 961 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-220ENST00000492280 COL11A1P12107 1806 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-220ENST00000492280 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms