RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 EDRF1Q3B7T1 1238 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 FAM114A1Q8IWE2 563 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 LRRC71Q8N4P6 559 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 RETREG2Q8NC44 543 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 KIFC3Q9BVG8 833 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 KATNAL1Q9BW62 490 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 XPNPEP3Q9NQH7 507 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 IFNKQ9P0W0 207 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 PTCH2Q9Y6C5 1203 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 KCNJ18B7U540 433 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 PGK1P00558 417 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 KLRC1P26715 233 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 GRK4P32298 578 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 PURAQ00577 322 aaKnown RBP22.97■■□□□ 1.27
SND1-214ENST00000489417 FKBP3Q00688 224 aaKnown RBP22.97■■□□□ 1.27
SND1-214ENST00000489417 MKRN4PQ13434 485 aaPredicted RBP22.97■■□□□ 1.27
SND1-214ENST00000489417 KCNJ12Q14500 433 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 GNASQ5JWF2 1037 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 EFCAB12Q6NXP0 572 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 LRRC55Q6ZSA7 311 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 PSPC1Q8WXF1 523 aaKnown RBP22.97■■□□□ 1.27
SND1-214ENST00000489417 TMEM206Q9H813 350 aa22.97■■□□□ 1.27
SND1-214ENST00000489417 MAGEC2Q9UBF1 373 aaPredicted RBP22.97■■□□□ 1.27
SND1-214ENST00000489417 ADGRA3Q8IWK6 1321 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 DENND3A2RUS2 1198 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 RRN3P2A6NIE6 340 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 TGFB1I1O43294 461 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ZEB2O60315 1214 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ADAMTS4O75173 837 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 SMIM10L2AP0DMW4 78 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 SMIM10L2BP0DMW5 78 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ABCD1P33897 745 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 DNM2P50570 870 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 TCP11X2Q5H9J9 407 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 MTHFD1LQ6UB35 978 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ZC3H3Q8IXZ2 948 aaKnown RBP22.96■■□□□ 1.27
SND1-214ENST00000489417 SYCP3Q8IZU3 236 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ANKRD20A12PQ8NF67 263 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 DEPTORQ8TB45 409 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 PRPF31Q8WWY3 499 aaKnown RBP22.96■■□□□ 1.27
SND1-214ENST00000489417 PDLIM2Q96JY6 352 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 CEP63Q96MT8 703 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 ARHGAP28Q9P2N2 729 aa22.96■■□□□ 1.27
SND1-214ENST00000489417 SUCLA2Q9P2R7 463 aaPredicted RBP22.96■■□□□ 1.27
SND1-214ENST00000489417 LIMA1Q9UHB6 759 aaKnown RBP22.96■■□□□ 1.27
SND1-214ENST00000489417 DDX20Q9UHI6 824 aaKnown RBP22.96■■□□□ 1.27
SND1-214ENST00000489417 LRRIQ4A6NIV6 560 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 CBFA2T2O43439 604 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 SCP2P22307 547 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 EEF1GP26641 437 aaKnown RBP22.95■■□□□ 1.26
SND1-214ENST00000489417 CLCN3P51790 818 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 UBASH3AP57075 661 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 CHMP4BP1P59074 171 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 CAPSQ13938 189 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 MXD4Q14582 209 aaPredicted RBP22.95■■□□□ 1.26
SND1-214ENST00000489417 HS2ST1Q7LGA3 356 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 METTL13Q8N6R0 699 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 LINC01465Q8N7H1 131 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 DNAJC5GQ8N7S2 189 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 ZBTB10Q96DT7 871 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 MRFAP1L1Q96HT8 127 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 PPP1R9BQ96SB3 815 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 MTG1Q9BT17 334 aaPredicted RBP22.95■■□□□ 1.26
SND1-214ENST00000489417 XPO4Q9C0E2 1151 aaKnown RBP22.95■■□□□ 1.26
SND1-214ENST00000489417 GBP3Q9H0R5 595 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 TBX20Q9UMR3 447 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 EXOC7Q9UPT5 735 aa22.95■■□□□ 1.26
SND1-214ENST00000489417 LAMTOR4Q0VGL1 99 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 KRT31Q15323 416 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 NFIL3Q16649 462 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 APTXQ7Z2E3 356 aaKnown RBP22.94■■□□□ 1.26
SND1-214ENST00000489417 GOLGA5Q8TBA6 731 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 KCNN1Q92952 543 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 EEF2KMTQ96G04 330 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 CNOT6LQ96LI5 555 aaKnown RBP22.94■■□□□ 1.26
SND1-214ENST00000489417 CTAGE1Q96RT6 745 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 IKZF4Q9H2S9 585 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 SETD4Q9NVD3 440 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 NRCAMQ92823 1304 aa22.94■■□□□ 1.26
SND1-214ENST00000489417 CETN3O15182 167 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 NR3C1P04150 777 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 RPL13P26373 211 aaKnown RBP22.93■■□□□ 1.26
SND1-214ENST00000489417 ADAM9Q13443 819 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 MARCH8Q5T0T0 291 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 CREBRFQ8IUR6 639 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 MAP4K3Q8IVH8 894 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 KLHDC9Q8NEP7 349 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 LMBR1Q8WVP7 490 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 HMX1Q9NP08 348 aaPredicted RBP22.93■■□□□ 1.26
SND1-214ENST00000489417 AGPAT3Q9NRZ7 376 aa22.93■■□□□ 1.26
SND1-214ENST00000489417 ASAP2O43150 1006 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 MSCO60682 206 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 NR2F2P24468 414 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 TMOD1P28289 359 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 CST5P28325 142 aaPredicted RBP22.92■■□□□ 1.26
SND1-214ENST00000489417 CDC25BP30305 580 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.92■■□□□ 1.26
SND1-214ENST00000489417 FILIP1Q7Z7B0 1213 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 NAP1L5Q96NT1 182 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms