RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 HAPLN2Q9GZV7 340 aa4.78□□□□□ -1.64
VPS50-216ENST00000484954 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
VPS50-216ENST00000484954 ZKSCAN5Q9Y2L8 839 aa4.78□□□□□ -1.64
VPS50-216ENST00000484954 VWA7Q9Y334 891 aa4.78□□□□□ -1.64
VPS50-216ENST00000484954 TNFRSF18Q9Y5U5 241 aa4.78□□□□□ -1.64
VPS50-216ENST00000484954 A0A0A6YYK5 440 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 GAS7O60861 476 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 BPIFB4P59827 614 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 ADCY2Q08462 1091 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 HNRNPA0Q13151 305 aaKnown RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 TCIRG1Q13488 830 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 NRN1LQ496H8 165 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 ZBTB41Q5SVQ8 909 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 KIAA0907Q7Z7F0 614 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 ADGRE4PQ86SQ3 457 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 CLEC14AQ86T13 490 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 KIF18BQ86Y91 864 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 C7orf31Q8N865 590 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 ANKRD53Q8N9V6 530 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 FEZ1Q99689 392 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 SOX7Q9BT81 388 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 PITHD1Q9GZP4 211 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 IKZF4Q9H2S9 585 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 TLR9Q9NR96 1032 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 SPTLC3Q9NUV7 552 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 POLR3BQ9NW08 1133 aaPredicted RBP4.77□□□□□ -1.65
VPS50-216ENST00000484954 IFT57Q9NWB7 429 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 SH3BP1Q9Y3L3 701 aa4.77□□□□□ -1.65
VPS50-216ENST00000484954 WDR33Q9C0J8 1336 aaKnown RBP4.76□□□□□ -1.65
VPS50-216ENST00000484954 A0A087X0B3 334 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 ADCYAP1R1P41586 468 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 PURAQ00577 322 aaKnown RBP4.76□□□□□ -1.65
VPS50-216ENST00000484954 BMP8AQ7Z5Y6 402 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 NME9Q86XW9 330 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 PHYKPLQ8IUZ5 450 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 D2HGDHQ8N465 521 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 EFHBQ8N7U6 833 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 RABGGTAQ92696 567 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 SLC7A6OSQ96CW6 309 aaPredicted RBP4.76□□□□□ -1.65
VPS50-216ENST00000484954 WDR92Q96MX6 357 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 CEP89Q96ST8 783 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 TBX22Q9Y458 520 aa4.76□□□□□ -1.65
VPS50-216ENST00000484954 A0A1W2PRX2 142 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 PMS2P1A4D2B8 440 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 GSG1L2A8MUP6 293 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 OPHN1O60890 802 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 H2AFYO75367 372 aaKnown RBP4.75□□□□□ -1.65
VPS50-216ENST00000484954 C1SP09871 688 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 BCAR1P56945 870 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
VPS50-216ENST00000484954 FOXE3Q13461 319 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 KIAA1841Q6NSI8 718 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 GAREM2Q75VX8 874 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
VPS50-216ENST00000484954 GCDHQ92947 438 aaPredicted RBP4.75□□□□□ -1.65
VPS50-216ENST00000484954 GFM2Q969S9 779 aaKnown RBP4.75□□□□□ -1.65
VPS50-216ENST00000484954 MFSD3Q96ES6 412 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 ZNF503Q96F45 646 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 SLC6A15Q9H2J7 730 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 NELFAQ9H3P2 528 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 MSRAQ9UJ68 235 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 PCSK5Q92824 1860 aa4.75□□□□□ -1.65
VPS50-216ENST00000484954 UBE2QL1A1L167 161 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 TOX4O94842 621 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 ZNF202O95125 648 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 PCDH8O95206 1070 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 HIBADHP31937 336 aaKnown RBP4.74□□□□□ -1.65
VPS50-216ENST00000484954 KPNA1P52294 538 aaPredicted RBP4.74□□□□□ -1.65
VPS50-216ENST00000484954 SESN2P58004 480 aaPredicted RBP4.74□□□□□ -1.65
VPS50-216ENST00000484954 ADCY1Q08828 1119 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 ABHD18Q0P651 414 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 LRRC32Q14392 662 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 MIIPQ5JXC2 388 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 SGMS1Q86VZ5 419 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 PLA2G15Q8NCC3 412 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 FAM89AQ96GI7 184 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 NOL10Q9BSC4 688 aaKnown RBP4.74□□□□□ -1.65
VPS50-216ENST00000484954 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS50-216ENST00000484954 PLAAQ9Y263 795 aa4.74□□□□□ -1.65
VPS50-216ENST00000484954 CAPN14A8MX76 684 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 ENPP3O14638 875 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 STC2O76061 302 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 MYCLP1P12525 358 aaPredicted RBP4.73□□□□□ -1.65
VPS50-216ENST00000484954 CD40P25942 277 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 ACRV1P26436 265 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 TIGD7Q6NT04 549 aaPredicted RBP4.73□□□□□ -1.65
VPS50-216ENST00000484954 Q6ZRM9 215 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 C1orf210Q8IVY1 113 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 DNAJC10Q8IXB1 793 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 PPM1KQ8N3J5 372 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 PIK3C3Q8NEB9 887 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 LEO1Q8WVC0 666 aaPredicted RBP4.73□□□□□ -1.65
VPS50-216ENST00000484954 LPPQ93052 612 aa4.73□□□□□ -1.65
VPS50-216ENST00000484954 FDXACB1Q9BRP7 624 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms