RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 OSGEPQ9NPF4 335 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 OLFML3Q9NRN5 406 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
ATG4B-220ENST00000482507 TMCO5BA8MYB1 307 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 PGRMC1O00264 195 aaKnown RBP16.18■□□□□ 0.18
ATG4B-220ENST00000482507 EVI5O60447 810 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 SLITRK3O94933 977 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-220ENST00000482507 NR1D1P20393 614 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 RPL13P26373 211 aaKnown RBP16.18■□□□□ 0.18
ATG4B-220ENST00000482507 LSP1P33241 339 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 GALCP54803 685 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 CEP85LQ5SZL2 805 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 C1orf186Q6ZWK4 172 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 PEX26Q7Z412 305 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 DYDC2Q96IM9 177 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 NR2E1Q9Y466 385 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 CHMP2AO43633 222 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 PPARDQ03181 441 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 TADA2BQ86TJ2 420 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 RASGEF1CQ8N431 466 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 PPM1EQ8WY54 764 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 GPR88Q9GZN0 384 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 WRAP73Q9P2S5 460 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 KRIT1O00522 736 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 CYP3A4P08684 503 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 BMP3P12645 472 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 ZNF76P36508 570 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 ITGB3BPQ13352 177 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 IFI16Q16666 785 aaKnown RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 CBWD6Q4V339 395 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 CBWD3Q5JTY5 395 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 CBWD5Q5RIA9 395 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 OTOP1Q7RTM1 612 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 DAAM2Q86T65 1068 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 TPH2Q8IWU9 490 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 FAM186BQ8IYM0 893 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 MYCT1Q8N699 235 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 HES6Q96HZ4 224 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 CALR3Q96L12 384 aaKnown RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 SYT11Q9BT88 431 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 TMBIM4Q9HC24 238 aa16.17■□□□□ 0.18
ATG4B-220ENST00000482507 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-220ENST00000482507 A0A087WUV0 522 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 A0A0A6YYK5 440 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 GTPBP10A4D1E9 387 aaKnown RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 PHF20L1A8MW92 1017 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 F8VZ95 297 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 NDUFAB1O14561 156 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 CPP00450 1065 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 INPP5BP32019 993 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 ECE1P42892 770 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 LIG3P49916 1009 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 TTC31Q49AM3 519 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 CELF4Q9BZC1 486 aaKnown RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 DAPK3O43293 454 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 ANXA13P27216 316 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 SEC24CP53992 1094 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 UBXN2AP68543 259 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 DCAF12L1Q5VU92 463 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 APOBEC3FQ8IUX4 373 aaKnown RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 KAT2BQ92831 832 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 ZKSCAN4Q969J2 545 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 GLIS2Q9BZE0 524 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-220ENST00000482507 RRAGCQ9HB90 399 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 PPP1R9AQ9ULJ8 1098 aa16.16■□□□□ 0.18
ATG4B-220ENST00000482507 ATP8B3O60423 1300 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 TTI1O43156 1089 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 PSMD10O75832 226 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 FAM13AO94988 1023 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 FERP16591 822 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 SOX5P35711 763 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 STAT1P42224 750 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 FMO5P49326 533 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 CUL1Q13616 776 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 MCTP2Q6DN12 878 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 EIF1ADQ8N9N8 165 aaKnown RBP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 BANK1Q8NDB2 785 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 DNAJC12Q9UKB3 198 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 EIF3DO15371 548 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 TBC1D12O60347 775 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 GAP43P17677 238 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms