RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 PPP1R9AQ9ULJ8 1098 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SFI1A8K8P3 1242 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 IGF2BP3O00425 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SLC26A4O43511 780 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 ABL1P00519 1130 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 WDR59Q6PJI9 974 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 AGGF1Q8N302 714 aaeCLIP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 CES2O00748 559 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 GYG2O15488 501 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 STAM2O75886 525 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 CDR2Q01850 454 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 DMP1Q13316 513 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 APBB1IPQ7Z5R6 666 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SYT2Q8N9I0 419 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 TRIM55Q9BYV6 548 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 GOLPH3Q9H4A6 298 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
DDX39B-219ENST00000481456 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
DDX39B-219ENST00000481456 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 MT-ND3P03897 115 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 COPS2P61201 443 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 SP4Q02446 784 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 NSMFQ6X4W1 530 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 ZKSCAN4Q969J2 545 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 CENPKQ9BS16 269 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 NPHP3-ACAD11A0A0J9YXS1 232 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 SLC9A1P19634 815 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 SCP2P22307 547 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 CHURC1Q8WUH1 139 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 CCDC97Q96F63 343 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 FOXP2O15409 715 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 KRT1P04264 644 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 YWHAGP61981 247 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 KRT17Q04695 432 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 WDR91A4D1P6 747 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 ZSCAN5CA6NGD5 496 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 MYCLP12524 364 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 GRB10Q13322 594 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 LONRF1Q17RB8 773 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 MREGQ8N565 214 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
DDX39B-219ENST00000481456 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 ANAPC7Q9UJX3 599 aa12.35□□□□□ -0.43
DDX39B-219ENST00000481456 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 SERPINB6P35237 376 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 DYNC1I2Q13409 638 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 BIRC2Q13490 618 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 STAT4Q14765 748 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 HSP90AA5PQ58FG0 334 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 TRIM59Q8IWR1 403 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 PACSIN1Q9BY11 444 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 A0A0G2JND7 137 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF233A6NK53 670 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 HNRNPCL1O60812 293 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 HAUS5O94927 633 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 SYDE1Q6ZW31 735 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 POMGNT1Q8WZA1 660 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 TMEM120BA0PK00 339 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 FGFR2P21802 821 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 STAT3P40763 770 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 SATB1Q01826 763 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 ZNF844Q08AG5 666 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 EIF1ADQ8N9N8 165 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 CARD9Q9H257 536 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 H0YCG3 227 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 KIF2BQ8N4N8 673 aa12.34□□□□□ -0.43
DDX39B-219ENST00000481456 MPHOSPH6Q99547 160 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
DDX39B-219ENST00000481456 FAM205AQ6ZU69 1335 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms