RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 CFAP100Q494V2 611 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-212ENST00000480226 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-212ENST00000480226 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 BMP8AQ7Z5Y6 402 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 TMPRSS6Q8IU80 811 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 ANKRD53Q8N9V6 530 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 NKD2Q969F2 451 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-212ENST00000480226 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 WDR92Q96MX6 357 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 POLR3BQ9NW08 1133 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-212ENST00000480226 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
ITGB1-212ENST00000480226 PTX3P26022 381 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 RRP1BQ14684 758 aaKnown RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 CREB3L3Q68CJ9 461 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 TIGD7Q6NT04 549 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 GAREM2Q75VX8 874 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 AMER2Q8N7J2 671 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 PLA2G15Q8NCC3 412 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 MIEF2Q96C03 454 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 GPHA2Q96T91 129 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 INTS7Q9NVH2 962 aaKnown RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-212ENST00000480226 ZKSCAN5Q9Y2L8 839 aa6.15□□□□□ -1.42
ITGB1-212ENST00000480226 SLC9A1P19634 815 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 POU3F2P20265 443 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-212ENST00000480226 ADCY2Q08462 1091 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 PLEKHG4Q58EX7 1191 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 KRT40Q6A162 431 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 CLEC14AQ86T13 490 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 PHYKPLQ8IUZ5 450 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 NIM1KQ8IY84 436 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 ZZZ3Q8IYH5 903 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 C7orf31Q8N865 590 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 ELF4Q99607 663 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-212ENST00000480226 FEZ1Q99689 392 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 TCF25Q9BQ70 676 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 SPO11Q9Y5K1 396 aa6.14□□□□□ -1.43
ITGB1-212ENST00000480226 UBE2QL1A1L167 161 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 PEX11BO96011 259 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 ADH4P08319 380 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 VSIG10L2P0DP72 767 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 MAKP20794 623 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 ADAM8P78325 824 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 CNGB1Q14028 1251 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-212ENST00000480226 MYBPC3Q14896 1274 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 PCBP1Q15365 356 aaKnown RBP eCLIP6.13□□□□□ -1.43
ITGB1-212ENST00000480226 LRRTM3Q86VH5 581 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 ZNF483Q8TF39 744 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-212ENST00000480226 ORAI3Q9BRQ5 295 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 CEP72Q9P209 647 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 HECAQ9UBI9 543 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-212ENST00000480226 DNAI1Q9UI46 699 aa6.13□□□□□ -1.43
ITGB1-212ENST00000480226 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
ITGB1-212ENST00000480226 LOC105371045A0A1W2PR82 267 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 PRPF6O94906 941 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 JUNP05412 331 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 MAN2A2P49641 1150 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 PURAQ00577 322 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 DPTQ07507 201 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 ELAVL1Q15717 326 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 MAN2A1Q16706 1144 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 SDE2Q6IQ49 451 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 KANSL1Q7Z3B3 1105 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 KIF18BQ86Y91 864 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 TARS2Q9BW92 718 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 OXSMQ9NWU1 459 aa6.12□□□□□ -1.43
ITGB1-212ENST00000480226 REXO2Q9Y3B8 237 aaKnown RBP6.12□□□□□ -1.43
ITGB1-212ENST00000480226 A0A087X0B3 334 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 A0A0A6YYJ9 748 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 KPNA6O60684 536 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 GAS7O60861 476 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 TOX4O94842 621 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 APOL3O95236 402 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 SEPT7Q16181 437 aaKnown RBP6.11□□□□□ -1.43
ITGB1-212ENST00000480226 CRB2Q5IJ48 1285 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 FNDC7Q5VTL7 733 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 KIAA1841Q6NSI8 718 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 ESRP1Q6NXG1 681 aaKnown RBP6.11□□□□□ -1.43
ITGB1-212ENST00000480226 CNNM4Q6P4Q7 775 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 PASD1Q8IV76 773 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 OSBPL6Q9BZF3 934 aa6.11□□□□□ -1.43
ITGB1-212ENST00000480226 PITHD1Q9GZP4 211 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-212ENST00000480226 C14orf93Q9H972 538 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms