RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ZNF131P52739 623 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 ELF3P78545 371 aaPredicted RBP14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 UBE2SQ16763 222 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 STXBP4Q6ZWJ1 553 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 JAMLQ86YT9 394 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 SLC35G2Q8TBE7 412 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 BORCS6Q96GS4 357 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 ANO3Q9BYT9 981 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 TRPC6Q9Y210 931 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 KIAA0391O15091 583 aaKnown RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 EVI5O60447 810 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CAND2O75155 1236 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CHN1P15882 459 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 MUTP22033 750 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 PDE6CP51160 858 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 SPIRE1Q08AE8 756 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 MYBPC2Q14324 1141 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 DCAF17Q5H9S7 520 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CYFIP1Q7L576 1253 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 SFR1Q86XK3 245 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CCDC63Q8NA47 563 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 ETNPPLQ8TBG4 499 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CRYGNQ8WXF5 182 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 RPS6KC1Q96S38 1066 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 REEP2Q9BRK0 252 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 DPH5Q9H2P9 285 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 EPB41L4BQ9H329 900 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 POLD4Q9HCU8 107 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CD209Q9NNX6 404 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 HOMER3Q9NSC5 361 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 JAG2Q9Y219 1238 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 PPP1R11O60927 126 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 ATP6V1G2O95670 118 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 EYA4O95677 639 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 HOXD13P35453 343 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 KIF22Q14807 665 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 FAM228AQ86W67 206 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 LNX1Q8TBB1 728 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 N4BP2L2Q92802 583 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 RSRC1Q96IZ7 334 aaKnown RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 ANKRD27Q96NW4 1050 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 GPCPD1Q9NPB8 672 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 INTS9Q9NV88 658 aaKnown RBP14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
HLA-DMA-208ENST00000477541 NPHP3-ACAD11A0A0J9YXS1 232 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 SPDYE3A6NKU9 549 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 O00370 1275 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 MTA2O94776 668 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 ALAS1P13196 640 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 RARGP13631 454 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 VCAM1P19320 739 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 CTNNA2P26232 953 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 POLD1P28340 1107 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 GRIK5Q16478 980 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 CYP1B1Q16678 543 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 TCERG1LQ5VWI1 586 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 TLDC1Q6P9B6 456 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 TRMT10CQ7L0Y3 403 aaKnown RBP14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 TRPM8Q7Z2W7 1104 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 MAB21L3Q8N8X9 362 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 CCDC17Q96LX7 622 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 CELF4Q9BZC1 486 aaKnown RBP14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 GOLPH3Q9H4A6 298 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 ZHX3Q9H4I2 956 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 KANSL2Q9H9L4 492 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 EBF2Q9HAK2 575 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 NOD2Q9HC29 1040 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 GPBP1L1Q9HC44 474 aaPredicted RBP14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 SUFUQ9UMX1 484 aa14.62□□□□□ -0.07
HLA-DMA-208ENST00000477541 DCDC2CA8MYV0 355 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 CIITAP33076 1130 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 PTGIRP43119 386 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 CASP5P51878 434 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 MKRN3Q13064 507 aaKnown RBP14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 ZNF268Q14587 947 aaPredicted RBP14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 ZDHHC24Q6UX98 284 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 CEP57Q86XR8 500 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 FAM186BQ8IYM0 893 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 LRRC47Q8N1G4 583 aaKnown RBP14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 MIEF2Q96C03 454 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 TRIM51Q9BSJ1 452 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 ADAM7Q9H2U9 754 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 KCND2Q9NZV8 630 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 ALADP13716 330 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 AKR1B1P15121 316 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 TNFAIP3P21580 790 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 FMO5P49326 533 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 SPRED3Q2MJR0 410 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 SEL1L2Q5TEA6 688 aa14.61□□□□□ -0.07
HLA-DMA-208ENST00000477541 DCAF12L1Q5VU92 463 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms