RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 VCPP55072 806 aaKnown RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 SMAD1Q15797 465 aaKnown RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 TMEM270Q6UE05 265 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 NSUN6Q8TEA1 469 aaKnown RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 SLC7A5P2Q9GIP4 190 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 RNF146Q9NTX7 359 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 FGFR1OP2Q9NVK5 253 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 PHLPP2Q6ZVD8 1323 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 ALKBH5Q6P6C2 394 aaKnown RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 ZNF467Q7Z7K2 595 aaPredicted RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 DYDC2Q96IM9 177 aa19.82■□□□□ 0.76
VARS2-209ENST00000477288 WARS2Q9UGM6 360 aaKnown RBP19.82■□□□□ 0.76
VARS2-209ENST00000477288 SFR1Q86XK3 245 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 MB21D1Q8N884 522 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 DACH2Q96NX9 599 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 KIF17Q9P2E2 1029 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 UBE4BO95155 1302 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 M0QYV0 167 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 IPO5O00410 1097 aaKnown RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 RPS6KA4O75676 772 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 NDUFA10O95299 355 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 DAB2P98082 770 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 C6orf118Q5T5N4 469 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 SYNE4Q8N205 404 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 TRIM55Q9BYV6 548 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 SPATS2LQ9NUQ6 558 aaKnown RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 NFU1Q9UMS0 254 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 FARP1Q9Y4F1 1045 aaPredicted RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 ABCC3O15438 1527 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 POTEMA6NI47 508 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 SPAG7O75391 227 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 GCLMP48507 274 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 TOGARAM2Q6ZUX3 1019 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 TEX12Q9BXU0 123 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 CNOT8Q9UFF9 292 aaKnown RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 MOCS2O96007 188 aaPredicted RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 MCF2P10911 925 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 POU5F1BQ06416 359 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 HLFQ16534 295 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 HIBCHQ6NVY1 386 aaPredicted RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 TMEM35BQ8NCS4 154 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 ENOX1Q8TC92 643 aaKnown RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 RNF14Q9UBS8 474 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 ADAMTS1Q9UHI8 967 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 CDK12Q9NYV4 1490 aaPredicted RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 USP17L10C9JJH3 530 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 E5RI56 91 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 TMCC1O94876 653 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 GUCY2CP25092 1073 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 GPSM2P81274 684 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 RHOT2Q8IXI1 618 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 RAPGEF5Q92565 580 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 ELAC2Q9BQ52 826 aaKnown RBP19.81■□□□□ 0.76
VARS2-209ENST00000477288 CPVLQ9H3G5 476 aa19.81■□□□□ 0.76
VARS2-209ENST00000477288 KRT37O76014 449 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 PYGBP11216 843 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 MCAMP43121 646 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 SWSAP1Q6NVH7 229 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 SLC26A7Q8TE54 656 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 SH3KBP1Q96B97 665 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L15C9J2P7 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L13C9JLJ4 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L11C9JVI0 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L18D6R9N7 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L22D6RA61 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L17D6RBQ6 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L19D6RCP7 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L20D6RJB6 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ADORA2BP29275 332 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L24Q0WX57 530 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 USP17L6PQ6QN14 398 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ASIC4Q96FT7 647 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 BRIP1Q9BX63 1249 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ADCY2Q08462 1091 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 NME3Q13232 169 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 TBC1D1Q86TI0 1168 aaPredicted RBP19.8■□□□□ 0.76
VARS2-209ENST00000477288 TAGAPQ8N103 731 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 SCG3Q8WXD2 468 aaKnown RBP19.8■□□□□ 0.76
VARS2-209ENST00000477288 SPATA33Q96N06 139 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 KIFC3Q9BVG8 833 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 PARD6BQ9BYG5 372 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 CPB1P15086 417 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ARL6IP4Q66PJ3 421 aaKnown RBP19.8■□□□□ 0.76
VARS2-209ENST00000477288 ACAD11Q709F0 780 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 NUDCD3Q8IVD9 361 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 POLD4Q9HCU8 107 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ARL4CP56559 192 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 APOBEC3FQ8IUX4 373 aaKnown RBP19.8■□□□□ 0.76
VARS2-209ENST00000477288 PITPNM3Q9BZ71 974 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ING2Q9H160 280 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 KIAA1586Q9HCI6 787 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 TBC1D22BQ9NU19 505 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ZNF212Q9UDV6 495 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
VARS2-209ENST00000477288 ARHGAP31Q2M1Z3 1444 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 LIFRP42702 1097 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 DGKHQ86XP1 1220 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 EGFL8Q99944 293 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms