RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TAF11Q15544 211 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 CNGA2Q16280 664 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 ALKBH5Q6P6C2 394 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 SLC30A9Q6PML9 568 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 H2AFVQ71UI9 128 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 ASRGL1Q7L266 308 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 DAAM2Q86T65 1068 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 LMNTD2Q8IXW0 634 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 RXFP1Q9HBX9 757 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 NCANO14594 1321 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 USP17L21D6R901 530 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 PLCG2P16885 1265 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 GNA11P29992 359 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 ATP5DP30049 168 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 TECP42680 631 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 BTDP43251 543 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 PTK2Q05397 1052 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 KLRC3Q07444 240 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 CFAP61Q8NHU2 1237 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 NAF1Q96HR8 494 aaKnown RBP16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 ROPN1BQ9BZX4 212 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 CARD9Q9H257 536 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 ROPN1Q9HAT0 212 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 DCP1AQ9NPI6 582 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 KRT16P08779 473 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 CCNB1P14635 433 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 LETM2Q2VYF4 491 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 IRF2BP2Q7Z5L9 587 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 FBF1Q8TES7 1133 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 ZFAND2BQ8WV99 257 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 RUNDC3BQ96NL0 473 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 PNMA5Q96PV4 448 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 TRIM51Q9BSJ1 452 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 C6orf50Q9HD87 102 aa16.48■□□□□ 0.23
CLSTN1-205ENST00000477264 GPR75-ASB3A0A0A6YYF3 556 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 NMT2O60551 498 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 HIP1RO75146 1068 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ATP5HO75947 161 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 NPTXRO95502 500 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 SHBGP04278 402 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 RAB27AP51159 221 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ROR2Q01974 943 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 LBRQ14739 615 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ZNF571Q7Z3V5 609 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 SH3RF3Q8TEJ3 882 aaPredicted RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 CELF4Q9BZC1 486 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 GOPCQ9HD26 462 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ADAM22Q9P0K1 906 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 GOLGB1Q14789 3259 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 LRRD1A4D1F6 860 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 SPDYE3A6NKU9 549 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 EVI5O60447 810 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ARID5AQ03989 594 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 COASYQ13057 564 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 PARP6Q2NL67 630 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 CWF19L1Q69YN2 538 aaKnown RBP16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 DDX12PQ92771 950 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 ZBTB10Q96DT7 871 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 YIPF3Q9GZM5 350 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 TXLNGQ9NUQ3 528 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
CLSTN1-205ENST00000477264 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 ATP4AP20648 1035 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 PPARDQ03181 441 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 PDIA5Q14554 519 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 SPATA21Q7Z572 469 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 SH3TC2Q8TF17 1288 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 RNF25Q96BH1 459 aaPredicted RBP16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 MCM9Q9NXL9 1143 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 LRRC42Q9Y546 428 aa16.46■□□□□ 0.23
CLSTN1-205ENST00000477264 ENO4A6NNW6 628 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 FGGP02679 453 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms