RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 CSDE1O75534 798 aaKnown RBP20.14■□□□□ 0.81
ABCB1-204ENST00000476862 ATP2B1P20020 1258 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 TXKP42681 527 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 NDUFV1P49821 464 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 NPEPPSP55786 919 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 CYP4A11Q02928 519 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 KRT17Q04695 432 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 CTTNQ14247 550 aaKnown RBP20.14■□□□□ 0.81
ABCB1-204ENST00000476862 LRRC43Q8N309 656 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 COLGALT1Q8NBJ5 622 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 NEK9Q8TD19 979 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 LLPHQ9BRT6 129 aaKnown RBP20.14■□□□□ 0.81
ABCB1-204ENST00000476862 RGL1Q9NZL6 768 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 PIN4Q9Y237 131 aaKnown RBP20.14■□□□□ 0.81
ABCB1-204ENST00000476862 COL4A3BPQ9Y5P4 624 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 REV3LO60673 3130 aa20.14■□□□□ 0.81
ABCB1-204ENST00000476862 A0A0U1RQF3 1178 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 FAM205CA6NFA0 338 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 GRXCR2A6NFK2 248 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 ASAP2O43150 1006 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 FGF18O76093 207 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 HMGN5P82970 282 aaKnown RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 GUCY1B3Q02153 619 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 HYAL1Q12794 435 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 BMS1Q14692 1282 aaKnown RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 PDE12Q6L8Q7 609 aaKnown RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 ZNF558Q96NG5 402 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 C1QTNF1Q9BXJ1 281 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 MRPL9Q9BYD2 267 aaKnown RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 TLR9Q9NR96 1032 aa20.13■□□□□ 0.81
ABCB1-204ENST00000476862 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
ABCB1-204ENST00000476862 FSD2A1L4K1 749 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 SRGAP2CP0DJJ0 459 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 PPM1AP35813 382 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
ABCB1-204ENST00000476862 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
ABCB1-204ENST00000476862 RSPH1Q8WYR4 309 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 CASD1Q96PB1 797 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 CEP89Q96ST8 783 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 MTRQ99707 1265 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 EIF2AK1Q9BQI3 630 aaKnown RBP20.12■□□□□ 0.81
ABCB1-204ENST00000476862 TLE6Q9H808 572 aa20.12■□□□□ 0.81
ABCB1-204ENST00000476862 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
ABCB1-204ENST00000476862 BMP2KQ9NSY1 1161 aaPredicted RBP20.12■□□□□ 0.81
ABCB1-204ENST00000476862 CARNS1A5YM72 827 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 IL9P15248 144 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 NRIP1P48552 1158 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 RAB27AP51159 221 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 SRGAP1Q7Z6B7 1085 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 KSR1Q8IVT5 923 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 FAM178BQ8IXR5 827 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 GJD3Q8N144 294 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 PRPF31Q8WWY3 499 aaKnown RBP20.11■□□□□ 0.81
ABCB1-204ENST00000476862 TMEM143Q96AN5 459 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
ABCB1-204ENST00000476862 DHX33Q9H6R0 707 aaKnown RBP20.11■□□□□ 0.81
ABCB1-204ENST00000476862 PLXNA4Q9HCM2 1894 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 SRGAP2BP0DMP2 458 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 DNAJB1P25685 340 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 MCM7P33993 719 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 ALDH7A1P49419 539 aaKnown RBP20.1■□□□□ 0.81
ABCB1-204ENST00000476862 TFDP1Q14186 410 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 EMC2Q15006 297 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 CLUL1Q15846 466 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 KCNT2Q6UVM3 1135 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 HELQQ8TDG4 1101 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 CWH43Q9H720 699 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 ENTPD7Q9NQZ7 604 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 SPG21Q9NZD8 308 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 ATG2AQ2TAZ0 1938 aa20.1■□□□□ 0.81
ABCB1-204ENST00000476862 SPTBN5Q9NRC6 3674 aaKnown RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 ERLIN2O94905 339 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 SLITRK3O94933 977 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 IRS1P35568 1242 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 PHKA2P46019 1235 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 RNASELQ05823 741 aaKnown RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 LAMTOR4Q0VGL1 99 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 ADAM15Q13444 863 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 CAMK1Q14012 370 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 MXD4Q14582 209 aaPredicted RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 COL19A1Q14993 1142 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 GLB1LQ6UWU2 654 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 EFHBQ8N7U6 833 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 TMEM87AQ8NBN3 555 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 ERMNQ8TAM6 284 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 MRPS27Q92552 414 aaKnown RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 CDCA3Q99618 268 aaPredicted RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 ANKEF1Q9NU02 776 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 WRAP73Q9P2S5 460 aaPredicted RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 PRKAG3Q9UGI9 489 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 CD207Q9UJ71 328 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 NOL7Q9UMY1 257 aaKnown RBP20.09■□□□□ 0.81
ABCB1-204ENST00000476862 LZTS1Q9Y250 596 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 KIF3AQ9Y496 699 aa20.09■□□□□ 0.81
ABCB1-204ENST00000476862 CA8P35219 290 aa20.08■□□□□ 0.81
ABCB1-204ENST00000476862 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
ABCB1-204ENST00000476862 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms