RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ATAT1Q5SQI0 421 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 TMC5Q6UXY8 1006 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 CCDC105Q8IYK2 499 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 MRPL9Q9BYD2 267 aaKnown RBP22.39■■□□□ 1.17
CCDC78-208ENST00000471861 CYP26B1Q9NR63 512 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 TBC1D22BQ9NU19 505 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 DMXL1Q9Y485 3027 aa22.39■■□□□ 1.17
CCDC78-208ENST00000471861 ZC3H11AO75152 810 aaKnown RBP eCLIP22.38■■□□□ 1.17
CCDC78-208ENST00000471861 PSAPP07602 524 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 DRP2Q13474 957 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 UGCGQ16739 394 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 RTN1Q16799 776 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 LENG9Q96B70 501 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 FAM167AQ96KS9 214 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 TCEANC2Q96MN5 208 aa22.38■■□□□ 1.17
CCDC78-208ENST00000471861 MEIS3P2A8K0S8 358 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 B4GALT3O60512 393 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 OATP04181 439 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 CDC27P30260 824 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 SETQ01105 290 aaPredicted RBP22.37■■□□□ 1.17
CCDC78-208ENST00000471861 PRKCEQ02156 737 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 ANGPT1Q15389 498 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 DDX53Q86TM3 631 aaKnown RBP22.37■■□□□ 1.17
CCDC78-208ENST00000471861 LPPQ93052 612 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 IGSF21Q96ID5 467 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 DUSP12Q9UNI6 340 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 C2orf16Q68DN1 1984 aa22.37■■□□□ 1.17
CCDC78-208ENST00000471861 TMOD1P28289 359 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 POLGP54098 1239 aaPredicted RBP22.36■■□□□ 1.17
CCDC78-208ENST00000471861 PTPN14Q15678 1187 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 SYNE3Q6ZMZ3 975 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 GPR149Q86SP6 731 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 GLT8D2Q9H1C3 349 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 NRDE2Q9H7Z3 1164 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 TBC1D13Q9NVG8 400 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 ZNF292O60281 2723 aa22.36■■□□□ 1.17
CCDC78-208ENST00000471861 ZBTB43O43298 467 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 GALTP07902 379 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 PHKA2P46019 1235 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 TDGQ13569 410 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 LONRF3Q496Y0 759 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 PRR16Q569H4 304 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 CCDC149Q6ZUS6 474 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 CABP7Q86V35 215 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 ZNF710Q8N1W2 664 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 NLRP7Q8WX94 980 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 SCLT1Q96NL6 688 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 SFXN1Q9H9B4 322 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 DACT1Q9NYF0 836 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 DNAJB4Q9UDY4 337 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 WDR87Q6ZQQ6 2873 aa22.35■■□□□ 1.17
CCDC78-208ENST00000471861 WDR64B1ANS9 1081 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 EDIL3O43854 480 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 BMS1Q14692 1282 aaKnown RBP22.34■■□□□ 1.17
CCDC78-208ENST00000471861 DTWD2Q8NBA8 298 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 ESYT1Q9BSJ8 1104 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 TRAIPQ9BWF2 469 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 KCNK12Q9HB15 430 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 SAMM50Q9Y512 469 aa22.34■■□□□ 1.17
CCDC78-208ENST00000471861 ESYT2A0FGR8 921 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 GOLGA8AA7E2F4 631 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 GOLGA8BA8MQT2 603 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 NARSO43776 548 aaKnown RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 N4BP1O75113 896 aaKnown RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 CIITAP33076 1130 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 SLC11A1P49279 550 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 EXOSC10Q01780 885 aaKnown RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 GIT2Q14161 759 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 TARBP2Q15633 366 aaKnown RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 PFKFB3Q16875 520 aaPredicted RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 SIX5Q8N196 739 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 ACSF2Q96CM8 615 aaPredicted RBP22.33■■□□□ 1.17
CCDC78-208ENST00000471861 CEP89Q96ST8 783 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 ZMYND12Q9H0C1 365 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 DISC1Q9NRI5 854 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 TCEAL9Q9UHQ7 104 aa22.33■■□□□ 1.17
CCDC78-208ENST00000471861 CLCN4P51793 760 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 TBC1D8BQ0IIM8 1120 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 OTOP3Q7RTS5 596 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 TMEM87AQ8NBN3 555 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 KLHL5Q96PQ7 755 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 CHST12Q9NRB3 414 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 INPP5FQ9Y2H2 1132 aa22.32■■□□□ 1.16
CCDC78-208ENST00000471861 EP300Q09472 2414 aaPredicted RBP22.31■■□□□ 1.16
CCDC78-208ENST00000471861 TMEM150BA6NC51 233 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 NOMO2Q5JPE7 1267 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 ZNF280BQ86YH2 543 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 REXO1Q8N1G1 1221 aaKnown RBP22.31■■□□□ 1.16
CCDC78-208ENST00000471861 RTP3Q9BQQ7 232 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 NRBP2Q9NSY0 501 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 FBXL21Q9UKT6 434 aa22.31■■□□□ 1.16
CCDC78-208ENST00000471861 A0A087WZ62 844 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 KLF18A0A0U1RQI7 1052 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 KRBA1A5PL33 1030 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 MSH4O15457 936 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 LILRB3O75022 631 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 OFD1O75665 1012 aa22.3■■□□□ 1.16
CCDC78-208ENST00000471861 CNPP09543 421 aaKnown RBP22.3■■□□□ 1.16
CCDC78-208ENST00000471861 AFF1P51825 1210 aaKnown RBP22.3■■□□□ 1.16
CCDC78-208ENST00000471861 LETM2Q2VYF4 491 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms