RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ADSSP30520 456 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 HOXA11P31270 313 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 GPC3P51654 580 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 PEX3P56589 373 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 POU5F1BQ06416 359 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 TYRO3Q06418 890 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 LAMTOR4Q0VGL1 99 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 ZNF658Q5TYW1 1059 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 IER5Q5VY09 327 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 ZSWIM2Q8NEG5 633 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 TMEM174Q8WUU8 243 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 PAWRQ96IZ0 340 aaKnown RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 TIPINQ9BVW5 301 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 KATNAL1Q9BW62 490 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 NFKBIZQ9BYH8 718 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 FZD8Q9H461 694 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 PTPRHQ9HD43 1115 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 SUCLA2Q9P2R7 463 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 KIAA0100Q14667 2235 aaKnown RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 C17orf102A2RUQ5 167 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 SLC16A4O15374 487 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 AP5Z1O43299 807 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 ZEB2O60315 1214 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 CSDE1O75534 798 aaKnown RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 PIGRP01833 764 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 CYP2C9P11712 490 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 NAMPTP43490 491 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 NLRP12P59046 1061 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 PTENP60484 403 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 ASIC1P78348 528 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 MBTD1Q05BQ5 628 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 TBC1D8BQ0IIM8 1120 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 CENPPQ6IPU0 288 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 TTI2Q6NXR4 508 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 APTXQ7Z2E3 356 aaKnown RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 TRIML1Q8N9V2 468 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 MCPH1Q8NEM0 835 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 KIFAP3Q92845 792 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 SENP6Q9GZR1 1112 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 AGO3Q9H9G7 860 aaKnown RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 C17orf75Q9HAS0 396 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 PARVGQ9HBI0 331 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 DMAC2Q9NW81 257 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-207ENST00000471342 TBC1D7Q9P0N9 293 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 TBX21Q9UL17 535 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 STYXL1Q9Y6J8 313 aa10.94□□□□□ -0.66
SF3A1-207ENST00000471342 A0A087WZ62 844 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 A0A0U1RQG5 324 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 ANKRD63C9JTQ0 380 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 PRPF6O94906 941 aaKnown RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 TFRCP02786 760 aaKnown RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 PROZP22891 400 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 POLGP54098 1239 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 AMPD3Q01432 767 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 PSMD2Q13200 908 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 PTK7Q13308 1070 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 HERC4Q5GLZ8 1057 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 FAM26FQ5R3K3 315 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 HAUS6Q7Z4H7 955 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 DHX40Q8IX18 779 aaKnown RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 GUF1Q8N442 669 aaKnown RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 C7orf31Q8N865 590 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 SMARCE1Q969G3 411 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 BORCS6Q96GS4 357 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 GLT1D1Q96MS3 346 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-207ENST00000471342 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 STARD7Q9NQZ5 370 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 SEL1LQ9UBV2 794 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
SF3A1-207ENST00000471342 TRIP12Q14669 1992 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-207ENST00000471342 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 B4GALT5O43286 388 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 GAP43P17677 238 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 WNT7BP56706 349 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 TLE2Q04725 743 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 FAM187BQ17R55 369 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-207ENST00000471342 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 UBXN11Q5T124 520 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 ZNF618Q5T7W0 954 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 EEF1DP3Q658K8 133 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 ANKRD40Q6AI12 368 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 LRSAM1Q6UWE0 723 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 RTN4RL1Q86UN2 441 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-207ENST00000471342 MAP4K3Q8IVH8 894 aa10.92□□□□□ -0.66
SF3A1-207ENST00000471342 CRIPAKQ8N1N5 446 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms