RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RHPN2Q8IUC4 686 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 NECAB3Q96P71 396 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-211ENST00000471260 SH2D3AQ9BRG2 576 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 FDXACB1Q9BRP7 624 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-211ENST00000471260 SH2B1Q9NRF2 756 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-211ENST00000471260 CLDND1Q9NY35 253 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 LZTS1Q9Y250 596 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 CARNS1A5YM72 827 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 FAM205CA6NFA0 338 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 NEMFO60524 1076 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 DTNBO60941 627 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 SLITRK3O94933 977 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 LYPLA2O95372 231 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 POLGP54098 1239 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 NPEPPSP55786 919 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 HMGN5P82970 282 aaKnown RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 PLCB3Q01970 1234 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 HYAL1Q12794 435 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 ORC2Q13416 577 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 PLA2G4FQ68DD2 849 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 SRGAP1Q7Z6B7 1085 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 ZNF598Q86UK7 904 aaKnown RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 LRRC43Q8N309 656 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 COLGALT1Q8NBJ5 622 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 PSPC1Q8WXF1 523 aaKnown RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 DYDC2Q96IM9 177 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 ZNF668Q96K58 619 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 CASD1Q96PB1 797 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 HSD17B14Q9BPX1 270 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 CWH43Q9H720 699 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 RGL1Q9NZL6 768 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 WRAP73Q9P2S5 460 aaPredicted RBP15.08■□□□□ 0
HMGN1-211ENST00000471260 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
HMGN1-211ENST00000471260 FGF18O76093 207 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 DNAJB1P25685 340 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 PPM1AP35813 382 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 RAB27AP51159 221 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 ST3GAL1Q11201 340 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 ADAM15Q13444 863 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
HMGN1-211ENST00000471260 TPH2Q8IWU9 490 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 FAM178BQ8IXR5 827 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 THNSL1Q8IYQ7 743 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 NLRP4Q96MN2 994 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 MTMR9Q96QG7 549 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 EIF2AK1Q9BQI3 630 aaKnown RBP15.07■□□□□ 0
HMGN1-211ENST00000471260 C1QTNF1Q9BXJ1 281 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 MRPL9Q9BYD2 267 aaKnown RBP15.07■□□□□ 0
HMGN1-211ENST00000471260 IFT122Q9HBG6 1241 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 PRKAG3Q9UGI9 489 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
HMGN1-211ENST00000471260 KIAA1671Q9BY89 1806 aa15.07■□□□□ 0
HMGN1-211ENST00000471260 H3BQ06 376 aaPredicted RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 ZNF623O75123 536 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 XRCC6P12956 609 aaKnown RBP eCLIP15.06■□□□□ 0
HMGN1-211ENST00000471260 FGFR4P22455 802 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 LTBRP36941 435 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 PHKA2P46019 1235 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 POU5F1BQ06416 359 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 CTTNQ14247 550 aaKnown RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 MXD4Q14582 209 aaPredicted RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 XKR9Q5GH70 373 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 EP400NLQ6ZTU2 488 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 CATSPER4Q7RTX7 472 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 CCDC83Q8IWF9 413 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 EFHBQ8N7U6 833 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 PRPF31Q8WWY3 499 aaKnown RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 SNX21Q969T3 373 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 C8orf76Q96K31 380 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 CDCA3Q99618 268 aaPredicted RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
HMGN1-211ENST00000471260 TLR9Q9NR96 1032 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 ANKEF1Q9NU02 776 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 RNF19AQ9NV58 838 aa15.06■□□□□ 0
HMGN1-211ENST00000471260 CSDE1O75534 798 aaKnown RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 DGAT1O75907 488 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 IL9P15248 144 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 ATF7P17544 494 aaPredicted RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 IRS1P35568 1242 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 TXKP42681 527 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 CYP4A11Q02928 519 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 KRT17Q04695 432 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 LAMTOR4Q0VGL1 99 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 EMC2Q15006 297 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 CLLU1OSQ5K130 101 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 TWF2Q6IBS0 349 aaKnown RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 KCNT2Q6UVM3 1135 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 LRRC55Q6ZSA7 311 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 FERMT3Q86UX7 667 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 KSR1Q8IVT5 923 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 MICAL1Q8TDZ2 1067 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 MRPS27Q92552 414 aaKnown RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 ZNF558Q96NG5 402 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms