RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GPR135Q8IZ08 494 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF808Q8N4W9 903 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SHCBP1Q8NEM2 672 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 APPBP2Q92624 585 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 EDAQ92838 391 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SLC7A6OSQ96CW6 309 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 TMEM176AQ96HP8 235 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ELF4Q99607 663 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ORAI3Q9BRQ5 295 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 POLR3BQ9NW08 1133 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 H2AFY2Q9P0M6 372 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SAE1Q9UBE0 346 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 DENND2AQ9ULE3 1009 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 VWA7Q9Y334 891 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 CTDP1Q9Y5B0 961 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SPO11Q9Y5K1 396 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 MRPL42Q9Y6G3 142 aaKnown RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 A0A1W2PRX2 142 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PMS2P1A4D2B8 440 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 CAPN14A8MX76 684 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 GAS7O60861 476 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 H2AFYO75367 372 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ATP2A2P16615 1042 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 POU3F2P20265 443 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ACRV1P26436 265 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NEK4P51957 841 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 SESN2P58004 480 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ANTXR2P58335 489 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 BPIFB4P59827 614 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ADAM8P78325 824 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ATP2C1P98194 919 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PTH1RQ03431 593 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 COL10A1Q03692 680 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 FOXL1Q12952 345 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 TCIRG1Q13488 830 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 GRM7Q14831 915 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 SEPT7Q16181 437 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 LSM12Q3MHD2 195 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NRN1LQ496H8 165 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 USP39Q53GS9 565 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 CNNM4Q6P4Q7 775 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 MAMDC4Q6UXC1 1216 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 Q6ZSN1 163 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 BMP8AQ7Z5Y6 402 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NPM2Q86SE8 214 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 LRRTM3Q86VH5 581 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NME9Q86XW9 330 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PHYKPLQ8IUZ5 450 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 DHX37Q8IY37 1157 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NIM1KQ8IY84 436 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NXPE1Q8N323 547 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 D2HGDHQ8N465 521 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 EFHBQ8N7U6 833 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 CHTF18Q8WVB6 975 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 RTF1Q92541 710 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 RPGRQ92834 1020 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 GCDHQ92947 438 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NINJ1Q92982 152 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 LPPQ93052 612 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NKD2Q969F2 451 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 MFSD3Q96ES6 412 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 FAM89AQ96GI7 184 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 DYDC2Q96IM9 177 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 TUBGCP5Q96RT8 1024 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 FEZ1Q99689 392 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 MYL10Q9BUA6 226 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PITHD1Q9GZP4 211 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 HAPLN2Q9GZV7 340 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 CSRNP2Q9H175 543 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 NELFAQ9H3P2 528 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 POFUT1Q9H488 388 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 MTG2Q9H4K7 406 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ZMAT4Q9H898 229 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 AGO3Q9H9G7 860 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 TLR9Q9NR96 1032 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 TOMM22Q9NS69 142 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 OXSMQ9NWU1 459 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 THG1LQ9NWX6 298 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PLA2G3Q9NZ20 509 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 KCMF1Q9P0J7 381 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 DNAI1Q9UI46 699 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 PLAAQ9Y263 795 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 ZKSCAN5Q9Y2L8 839 aa2.13□□□□□ -2.07
UBXN4-207ENST00000471246 RBM8AQ9Y5S9 174 aaKnown RBP2.13□□□□□ -2.07
UBXN4-207ENST00000471246 C2orf78A6NCI8 922 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 PLSCR1O15162 318 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 OPHN1O60890 802 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 PRPF6O94906 941 aaKnown RBP2.12□□□□□ -2.07
UBXN4-207ENST00000471246 APOL3O95236 402 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 F2P00734 622 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 BMP5P22003 454 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 CD40P25942 277 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ADCY7P51828 1080 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 BCAR1P56945 870 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ADCY2Q08462 1091 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ADCY1Q08828 1119 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ACAP1Q15027 740 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 GPR162Q16538 588 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ZBTB41Q5SVQ8 909 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 KIAA1841Q6NSI8 718 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms