RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 EXTL1Q92935 676 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 RPL10LQ96L21 214 aaKnown RBP7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 SLC6A15Q9H2J7 730 aa7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 POLR3BQ9NW08 1133 aaPredicted RBP7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.22□□□□□ -1.25
PRPF40A-206ENST00000471167 APOL3O95236 402 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 FKBP9O95302 570 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 AMHP03971 560 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 PFKMP08237 780 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 BPIP17213 487 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 ZXDAP98168 799 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 TCIRG1Q13488 830 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 GRM7Q14831 915 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 GPR158Q5T848 1215 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 CRIP3Q6Q6R5 217 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 FKBP9P1Q75LS8 142 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 SLC41A1Q8IVJ1 513 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 C7orf31Q8N865 590 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 ANKRD53Q8N9V6 530 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 ZNF610Q8N9Z0 462 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 LEO1Q8WVC0 666 aaPredicted RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 GFM2Q969S9 779 aaKnown RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 SLC7A6OSQ96CW6 309 aaPredicted RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 WDR92Q96MX6 357 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 CDK5RAP1Q96SZ6 601 aaKnown RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 FDXACB1Q9BRP7 624 aaPredicted RBP7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 EMC7Q9NPA0 242 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 MSRAQ9UJ68 235 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 SH3BP1Q9Y3L3 701 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 MYPNQ86TC9 1320 aa7.21□□□□□ -1.26
PRPF40A-206ENST00000471167 PRSS38A1L453 326 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 H2AFYO75367 372 aaKnown RBP7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 CD40P25942 277 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 SCNN1BP51168 640 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 BPIFB4P59827 614 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 PRKD1Q15139 912 aaPredicted RBP7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 ZZZ3Q8IYH5 903 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 AHI1Q8N157 1196 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 PLA2G15Q8NCC3 412 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 PIK3C3Q8NEB9 887 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 NELFAQ9H3P2 528 aa7.2□□□□□ -1.26
PRPF40A-206ENST00000471167 BROXQ5VW32 411 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 UBR7Q8N806 425 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 SCAND2PQ9GZW5 306 aaPredicted RBP7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 TMPRSS5Q9H3S3 457 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 MAPRE3Q9UPY8 281 aa7.19□□□□□ -1.26
PRPF40A-206ENST00000471167 NEMP1O14524 444 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 TOX4O94842 621 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 PCDH8O95206 1070 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 GAAP10253 952 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 SESN2P58004 480 aaPredicted RBP7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 DGCR2P98153 550 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 CD69Q07108 199 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 PDCD1Q15116 288 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 TIGD7Q6NT04 549 aaPredicted RBP7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 GAREM2Q75VX8 874 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 OR2W6PQ8NHA6 318 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 LPPQ93052 612 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 ZNF503Q96F45 646 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 NOL10Q9BSC4 688 aaKnown RBP7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 TLR9Q9NR96 1032 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 PPP2R3BQ9Y5P8 575 aa7.18□□□□□ -1.26
PRPF40A-206ENST00000471167 UBE2QL1A1L167 161 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 AKAP8O43823 692 aaKnown RBP7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 CFBP00751 764 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 USP39Q53GS9 565 aaKnown RBP7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 HS1BP3Q53T59 392 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 SDE2Q6IQ49 451 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 RNF207Q6ZRF8 634 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 CXorf67Q86X51 503 aaPredicted RBP7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 RPGRQ92834 1020 aaKnown RBP7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 GCDHQ92947 438 aaPredicted RBP7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 OSBPL6Q9BZF3 934 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 ENKD1Q9H0I2 346 aa7.17□□□□□ -1.26
PRPF40A-206ENST00000471167 STC2O76061 302 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 SEC24DO94855 1032 aaPredicted RBP7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 VSIG10L2P0DP72 767 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 KIR2DL3P43628 341 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 MANFP55145 182 aaKnown RBP7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 IL2P60568 153 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 TRIM25Q14258 630 aaKnown RBP7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 SLC5A5Q92911 643 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 ANO3Q9BYT9 981 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 ING3Q9NXR8 418 aa7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 USP36Q9P275 1121 aaKnown RBP7.16□□□□□ -1.26
PRPF40A-206ENST00000471167 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 C1SP09871 688 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 CLEC2LP0C7M8 214 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 C6P13671 934 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 TACR2P21452 398 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 ACVRL1P37023 503 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 MASP1P48740 699 aa7.15□□□□□ -1.26
PRPF40A-206ENST00000471167 FOXE3Q13461 319 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms