RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FBF1Q8TES7 1133 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 MAIP1Q8WWC4 291 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 HERVK_113Q902F9 699 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ARL5BQ96KC2 179 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EGLN2Q96KS0 407 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 AIFM2Q9BRQ8 373 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 KATNAL1Q9BW62 490 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 UBE2OQ9C0C9 1292 aaKnown RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 WNT5BQ9H1J7 359 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 GOLPH3LQ9H4A5 285 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 VPS37BQ9H9H4 285 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ELP3Q9H9T3 547 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 NCOA5Q9HCD5 579 aaKnown RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CYP4F12Q9HCS2 524 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 TBC1D22BQ9NU19 505 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 NDUFA13Q9P0J0 144 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CRNNQ9UBG3 495 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 HMGXB4Q9UGU5 601 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ADAM21Q9UKJ8 722 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 L1RE1Q9UN81 338 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EDARQ9UNE0 448 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EXOC7Q9UPT5 735 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 IPPQ9Y573 584 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CEP162Q5TB80 1403 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 PLEKHH1Q9ULM0 1364 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 KIF7Q2M1P5 1343 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 GPR75-ASB3A0A0A6YYF3 556 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PI4K2BG5E9Z4 385 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 HDAC3O15379 428 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PLOD3O60568 738 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 EIF2S1P05198 315 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 LINGO3P0C6S8 592 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 DLATP10515 647 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PTPN2P17706 415 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PRKACBP22694 351 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 TBXAS1P24557 533 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 NFKBIAP25963 317 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PBLDP30039 288 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 HNF1BP35680 557 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ADH7P40394 386 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 RAD52P43351 418 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 LMAN1P49257 510 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 MCM2P49736 904 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ACADVLP49748 655 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 NLRP5P59047 1200 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PIP4K2BP78356 416 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ACY1Q03154 408 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PTSQ03393 145 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 CETN1Q12798 172 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 FAPQ12884 760 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 MTX1Q13505 466 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 BLMHQ13867 455 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 SPIDRQ14159 915 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ZNF792Q3KQV3 632 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 KRBOX4Q5JUW0 171 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 INTS11Q5TA45 600 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 GKAP1Q5VSY0 366 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 IL23RQ5VWK5 629 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 TPGS2Q68CL5 300 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 SIGIRRQ6IA17 410 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 POMZP3Q6PJE2 187 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 XKR5Q6UX68 686 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 RANBP10Q6VN20 620 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 BZW1Q7L1Q6 419 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ZNF554Q86TJ5 538 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 SLC51BQ86UW2 128 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ZNF354CQ86Y25 554 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 FAM9CQ8IZT9 166 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 LRRC47Q8N1G4 583 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 CCDC155Q8N6L0 562 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 LSMEM1Q8N8F7 131 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ANKRD53Q8N9V6 530 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 SHCBP1Q8NEM2 672 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 OR6C4Q8NGE1 309 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 PI4K2BQ8TCG2 481 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 IRGQQ8WZA9 623 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 C11orf24Q96F05 449 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 MED30Q96HR3 178 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 CNDP2Q96KP4 475 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 FAM167AQ96KS9 214 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 MFSD14AQ96MC6 490 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ANKRD27Q96NW4 1050 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 ZPBPQ9BS86 351 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 NTPCRQ9BSD7 190 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 HERPUD2Q9BSE4 406 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 DRC3Q9H069 523 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 INTS2Q9H0H0 1204 aaKnown RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 GBP3Q9H0R5 595 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 STMN4Q9H169 189 aaPredicted RBP5.55□□□□□ -1.52
COL3A1-205ENST00000470167 VPS16Q9H269 839 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 VPS11Q9H270 941 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 CHRDQ9H2X0 955 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 EHD1Q9H4M9 534 aa5.55□□□□□ -1.52
COL3A1-205ENST00000470167 C12orf49Q9H741 205 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms