RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FAM26FQ5R3K3 315 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 CDCA2Q69YH5 1023 aaPredicted RBP12.32□□□□□ -0.44
VCP-204ENST00000466100 EPM2AIP1Q7L775 607 aaPredicted RBP12.32□□□□□ -0.44
VCP-204ENST00000466100 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 KIAA0895Q8NCT3 520 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 HPS3Q969F9 1004 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 TOX2Q96NM4 488 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
VCP-204ENST00000466100 STRA6Q9BX79 667 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
VCP-204ENST00000466100 ADAMTS10Q9H324 1103 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 EXOC1Q9NV70 894 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 LARSQ9P2J5 1176 aaKnown RBP12.32□□□□□ -0.44
VCP-204ENST00000466100 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
VCP-204ENST00000466100 ASAP2O43150 1006 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 PQBP1O60828 265 aaKnown RBP12.31□□□□□ -0.44
VCP-204ENST00000466100 GPR32O75388 356 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 RPLP2P05387 115 aaKnown RBP12.31□□□□□ -0.44
VCP-204ENST00000466100 MAPTP10636 758 aaKnown RBP12.31□□□□□ -0.44
VCP-204ENST00000466100 CASP5P51878 434 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 PEX3P56589 373 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 TLE2Q04725 743 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 STK4Q13043 487 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
VCP-204ENST00000466100 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
VCP-204ENST00000466100 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 NME8Q8N427 588 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 MYCT1Q8N699 235 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 GLIS3Q8NEA6 775 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 NFKBIZQ9BYH8 718 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 ST6GALNAC4Q9H4F1 302 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 IFT122Q9HBG6 1241 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
VCP-204ENST00000466100 CAND2O75155 1236 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
VCP-204ENST00000466100 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
VCP-204ENST00000466100 PTENP60484 403 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 MRPS6P82932 125 aaKnown RBP12.3□□□□□ -0.44
VCP-204ENST00000466100 FAAP100Q0VG06 881 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 PSMD2Q13200 908 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
VCP-204ENST00000466100 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 COBLL1Q53SF7 1204 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 FAM26DQ5JW98 314 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 TAS1R3Q7RTX0 852 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 ZNF720Q7Z2F6 126 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 ZNF410Q86VK4 478 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 FAM178BQ8IXR5 827 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 IFT74Q96LB3 600 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 ZHX3Q9H4I2 956 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 TBX21Q9UL17 535 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
VCP-204ENST00000466100 RANBP2P49792 3224 aaKnown RBP12.3□□□□□ -0.44
VCP-204ENST00000466100 A0A087WZ62 844 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 K7ENM7 598 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 BIN1O00499 593 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 SLC16A4O15374 487 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 CHRNA1P02708 482 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 SRGAP2CP0DJJ0 459 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 MYBP10242 640 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 CKBP12277 381 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 HOXD13P35453 343 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 GTF2BQ00403 316 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 BMT2Q1RMZ1 405 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 KIZQ2M2Z5 673 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 SMYD4Q8IYR2 804 aaPredicted RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 CAGE1Q8TC20 777 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 ZNF668Q96K58 619 aaPredicted RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 MRPL44Q9H9J2 332 aaKnown RBP12.29□□□□□ -0.44
VCP-204ENST00000466100 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms