RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CYP2C9P11712 490 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 STX17P56962 302 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 ADAM17P78536 824 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 CAPSQ13938 189 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 IER5Q5VY09 327 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 RHPN2Q8IUC4 686 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 NELFCDQ8IXH7 590 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 EXOC8Q8IYI6 725 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 TNS4Q8IZW8 715 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 LINC01465Q8N7H1 131 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 SLC43A3Q8NBI5 491 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 TCP11Q8WWU5 503 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 PSPC1Q8WXF1 523 aaKnown RBP18.99■□□□□ 0.63
PTPRU-206ENST00000465525 PAWRQ96IZ0 340 aaKnown RBP18.99■□□□□ 0.63
PTPRU-206ENST00000465525 IFT74Q96LB3 600 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 SEL1LQ9UBV2 794 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 GTF2IRD1Q9UHL9 959 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 AKT3Q9Y243 479 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 DNAH12Q6ZR08 3092 aa18.99■□□□□ 0.63
PTPRU-206ENST00000465525 SRGAP2CP0DJJ0 459 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 DNM2P50570 870 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 KCNA1Q09470 495 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 LAMTOR4Q0VGL1 99 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 NECAB2Q7Z6G3 386 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 ADSSL1Q8N142 457 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 DIS3LQ8TF46 1054 aaKnown RBP18.98■□□□□ 0.63
PTPRU-206ENST00000465525 SCFD1Q8WVM8 642 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 RBSNQ9H1K0 784 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 IKZF4Q9H2S9 585 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 KMT5AQ9NQR1 393 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 MBLAC1A4D2B0 266 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-206ENST00000465525 ARVCFO00192 962 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
PTPRU-206ENST00000465525 HOXC8P31273 242 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 ZNF165P49910 485 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 TMEM62Q0P6H9 643 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 ZNF720Q7Z2F6 126 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 HAUS6Q7Z4H7 955 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 KIAA0319LQ8IZA0 1049 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 MYOCDQ8IZQ8 938 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 NELFBQ8WX92 580 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 NLRP4Q96MN2 994 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 MED15Q96RN5 788 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
PTPRU-206ENST00000465525 SIP14410 1827 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 HOXD13P35453 343 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 CDK7P50613 346 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 NCKAP1LP55160 1127 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 RTP1P59025 263 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 SLC39A5Q6ZMH5 540 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 EPM2AIP1Q7L775 607 aaPredicted RBP18.97■□□□□ 0.63
PTPRU-206ENST00000465525 LUZP1Q86V48 1076 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 AOPEPQ8N6M6 819 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 DEPTORQ8TB45 409 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 DNAJB3Q8WWF6 145 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
PTPRU-206ENST00000465525 TMOD1P28289 359 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 NAMPTP43490 491 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 SMTNP53814 917 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
PTPRU-206ENST00000465525 STIM1Q13586 685 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 RNF149Q8NC42 400 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 TMEM161BQ8NDZ6 487 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 MAP7D2Q96T17 732 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 C17orf75Q9HAS0 396 aa18.96■□□□□ 0.63
PTPRU-206ENST00000465525 TRMT13Q9NUP7 481 aaKnown RBP18.96■□□□□ 0.63
PTPRU-206ENST00000465525 DENND3A2RUS2 1198 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 MXD4Q14582 209 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 PPP2R5AQ15172 486 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 C1orf53Q5VUE5 145 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 SPIRE2Q8WWL2 714 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 WNT8BQ93098 351 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 NAT10Q9H0A0 1025 aaKnown RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 USP20Q9Y2K6 914 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 SMIM35A0A1B0GVV1 85 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 CCDC85CA6NKD9 419 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 PSMA7O14818 248 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 PPP1R37O75864 691 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 PAK1Q13153 545 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 PTGISQ16647 500 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 DHX40Q8IX18 779 aaKnown RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 FAM200AQ8TCP9 573 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 SCLT1Q96NL6 688 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 STRA6Q9BX79 667 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 GTPBP4Q9BZE4 634 aaKnown RBP18.95■□□□□ 0.62
PTPRU-206ENST00000465525 GINS2Q9Y248 185 aa18.95■□□□□ 0.62
PTPRU-206ENST00000465525 ZMYM2Q9UBW7 1377 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 MROH7Q68CQ1 1323 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 A0A087WZ62 844 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 CSDE1O75534 798 aaKnown RBP18.94■□□□□ 0.62
PTPRU-206ENST00000465525 MAPTP10636 758 aaKnown RBP18.94■□□□□ 0.62
PTPRU-206ENST00000465525 NLRP11P59045 1033 aaKnown RBP18.94■□□□□ 0.62
PTPRU-206ENST00000465525 IQCB1Q15051 598 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms