RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ACSS2Q9NR19 701 aa4.27□□□□□ -1.73
SNX4-202ENST00000465505 PARPBPQ9NWS1 579 aa4.27□□□□□ -1.73
SNX4-202ENST00000465505 SAMD15Q9P1V8 674 aa4.27□□□□□ -1.73
SNX4-202ENST00000465505 RBM8AQ9Y5S9 174 aaKnown RBP4.27□□□□□ -1.73
SNX4-202ENST00000465505 A0A087X1B8 175 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 TRAF5O00463 557 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 GLRX3O76003 335 aaKnown RBP4.26□□□□□ -1.73
SNX4-202ENST00000465505 RAPGEF3O95398 923 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 PEX11BO96011 259 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 ADH4P08319 380 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 SCNN1GP51170 649 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 INHBCP55103 352 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 BPIFB4P59827 614 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 FAM193AP78312 1265 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 SLC25A3Q00325 362 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 DGKDQ16760 1214 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 FAM111BQ6SJ93 734 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 Q6ZRM9 215 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 TSHZ1Q6ZSZ6 1077 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 GAREM2Q75VX8 874 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 DDX53Q86TM3 631 aaKnown RBP4.26□□□□□ -1.73
SNX4-202ENST00000465505 LDLRAD3Q86YD5 345 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 NME8Q8N427 588 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 ANKRD53Q8N9V6 530 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 GCDHQ92947 438 aaPredicted RBP4.26□□□□□ -1.73
SNX4-202ENST00000465505 ZNF622Q969S3 477 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNX4-202ENST00000465505 MIEF2Q96C03 454 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 C16orf92Q96LL3 132 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 SLC2A4RGQ9NR83 387 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 KCMF1Q9P0J7 381 aa4.26□□□□□ -1.73
SNX4-202ENST00000465505 UBE2QL1A1L167 161 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 PTPDC1A2A3K4 754 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 B4E1Z4 1266 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 CYP17A1P05093 508 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 IGFALSP35858 605 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 INHBEP58166 350 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 CRHR2Q13324 411 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 TCIRG1Q13488 830 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 FNDC3BQ53EP0 1204 aaKnown RBP4.25□□□□□ -1.73
SNX4-202ENST00000465505 TTC38Q5R3I4 469 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 SLFN12LQ6IEE8 588 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 Q6ZPA2 131 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 NOL8Q76FK4 1167 aaKnown RBP4.25□□□□□ -1.73
SNX4-202ENST00000465505 CLEC14AQ86T13 490 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 ULK2Q8IYT8 1036 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 PLA2G15Q8NCC3 412 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 CHST14Q8NCH0 376 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 CLIP3Q96DZ5 547 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 HAPLN2Q9GZV7 340 aa4.25□□□□□ -1.73
SNX4-202ENST00000465505 XDHP47989 1333 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 UBA6A0AVT1 1052 aaPredicted RBP4.24□□□□□ -1.73
SNX4-202ENST00000465505 GOLGA8BA8MQT2 603 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 TPD52L2O43399 206 aaKnown RBP4.24□□□□□ -1.73
SNX4-202ENST00000465505 ASLP04424 464 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 VSIG10L2P0DP72 767 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 KRT4P19013 534 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 PTX3P26022 381 aaPredicted RBP4.24□□□□□ -1.73
SNX4-202ENST00000465505 MYBPC2Q14324 1141 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 GAGE13Q4V321 117 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 PCSK4Q6UW60 755 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 BMP8AQ7Z5Y6 402 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 GSPT2Q8IYD1 628 aaKnown RBP4.24□□□□□ -1.73
SNX4-202ENST00000465505 PMFBP1Q8TBY8 1022 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 TCF25Q9BQ70 676 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 IL23AQ9NPF7 189 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 TERF2IPQ9NYB0 399 aa4.24□□□□□ -1.73
SNX4-202ENST00000465505 TNPO3Q9Y5L0 923 aaKnown RBP4.24□□□□□ -1.73
SNX4-202ENST00000465505 DNAJC8O75937 253 aaPredicted RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 TOX4O94842 621 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 MAN2A2P49641 1150 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 OS9Q13438 667 aaPredicted RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 CNGB1Q14028 1251 aaPredicted RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 TOB2Q14106 344 aaPredicted RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 ZNF460Q14592 562 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 MYBPC3Q14896 1274 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 EPHA7Q15375 998 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 ELAVL1Q15717 326 aaKnown RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 KANSL1Q7Z3B3 1105 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 NME9Q86XW9 330 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 KIAA1958Q8N8K9 716 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 DYDC2Q96IM9 177 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 TUBGCP5Q96RT8 1024 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 UBA5Q9GZZ9 404 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 CHMP4BQ9H444 224 aaKnown RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 GPRC5BQ9NZH0 403 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 B4GALT6Q9UBX8 382 aa4.23□□□□□ -1.73
SNX4-202ENST00000465505 REXO2Q9Y3B8 237 aaKnown RBP4.23□□□□□ -1.73
SNX4-202ENST00000465505 TTC36A6NLP5 189 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 HMGB1P1B2RPK0 211 aaPredicted RBP4.22□□□□□ -1.73
SNX4-202ENST00000465505 H7C1D1 291 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 OPA1O60313 960 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 MARCH6O60337 910 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 JUNP05412 331 aaKnown RBP4.22□□□□□ -1.73
SNX4-202ENST00000465505 HNRNPLP14866 589 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNX4-202ENST00000465505 SLC9A1P19634 815 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 RABGGTBP53611 331 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 BCAR1P56945 870 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms