RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TTC14Q96N46 770 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 ALG1Q9BT22 464 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 CCDC94Q9BW85 323 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 PLVAPQ9BX97 442 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 OSBPL7Q9BZF2 842 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 S1PR5Q9H228 398 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 NXF1Q9UBU9 619 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 NR2E1Q9Y466 385 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 SNX14Q9Y5W7 946 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 LCTP09848 1927 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 FANCMQ8IYD8 2048 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 BAZ2BQ9UIF8 2168 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 M0R2N6 131 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 IFIT3O14879 490 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 PRC1O43663 620 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 ITGB1P05556 798 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 BMP3P12645 472 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 SNAP25P60880 206 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 BTG3Q14201 252 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 ADCK5Q3MIX3 580 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 IFIT1BQ5T764 474 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CWF19L1Q69YN2 538 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 BLOC1S2Q6QNY1 142 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CLEC17AQ6ZS10 378 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 GMCL1P1Q8NEA9 526 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 MICAL1Q8TDZ2 1067 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 SCFD2Q8WU76 684 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CHURC1Q8WUH1 139 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 POF1BQ8WVV4 589 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 KCNB2Q92953 911 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 P2RX5Q93086 422 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 MKL1Q969V6 931 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CHMP4CQ96CF2 233 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 SPSB2Q99619 263 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 RTP3Q9BQQ7 232 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 APOL5Q9BWW9 433 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CHMP5Q9NZZ3 219 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 SYNPO2Q9UMS6 1093 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 FCF1Q9Y324 198 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 CACNA1IQ9P0X4 2223 aa6.82□□□□□ -1.32
SMARCC1-204ENST00000462198 WDR19Q8NEZ3 1342 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 LOC102724159A0A0B4J2E5 919 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 PPFIA3O75145 1194 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 OFD1O75665 1012 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ARIH2O95376 493 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ASGR2P07307 311 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 MMP3P08254 477 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ANTXR2P58335 489 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ANAPC15P60006 121 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 WTAPQ15007 396 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 PWP2Q15269 919 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 SLFN13Q68D06 897 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 NFXL1Q6ZNB6 911 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 CAPN12Q6ZSI9 719 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 TMTC2Q8N394 836 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 FAM160A2Q8N612 972 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 GPR161Q8N6U8 529 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 KLHL23Q8NBE8 558 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 SUMF1Q8NBK3 374 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 VN1R2Q8NFZ6 395 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 SNIP1Q8TAD8 396 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 RIN2Q8WYP3 895 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 SNX21Q969T3 373 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ZNF689Q96CS4 500 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 TMEM87BQ96K49 555 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 TMEM47Q9BQJ4 181 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 RTKNQ9BST9 563 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 CYP46A1Q9Y6A2 500 aa6.81□□□□□ -1.32
SMARCC1-204ENST00000462198 ADGRA3Q8IWK6 1321 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CCDC66A2RUB6 948 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CCDC69A6NI79 296 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 PRR5-ARHGAP8B1AHC4 643 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 C2CD4DB7Z1M9 353 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 WNT7AO00755 349 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 ENPP3O14638 875 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CPA1P15085 419 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 ZSCAN20P17040 1043 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 RPS6KB1P23443 525 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 TECP42680 631 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SLC1A4P43007 532 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 NOVP48745 357 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 STAT2P52630 851 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 TTC3P53804 2025 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 ARHGAP8P85298 464 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 DMWDQ09019 674 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 IKQ13123 557 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SEC23AQ15436 765 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 DGKDQ16760 1214 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 LY6KQ17RY6 165 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 KIAA0753Q2KHM9 967 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CCDC96Q2M329 555 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms