RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 HSD3B7Q9H2F3 369 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 AZI2Q9H6S1 392 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 MRPL44Q9H9J2 332 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 MLXIPQ9HAP2 919 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 C17orf75Q9HAS0 396 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 ZNF302Q9NR11 478 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 GABBR1Q9UBS5 961 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 LIMA1Q9UHB6 759 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 MAPK8IP1Q9UQF2 711 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 SYNGAP1Q96PV0 1343 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 H0YCG3 227 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 AP5Z1O43299 807 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 PEX10O60683 326 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 DGAT1O75907 488 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 ATG7O95352 703 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 GCNT3O95395 438 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 GGPS1O95749 300 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 HOXC6P09630 235 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 ATP1A3P13637 1013 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 RPL13P26373 211 aaKnown RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 SLC26A2P50443 739 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 FKBP3Q00688 224 aaKnown RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 PRKCEQ02156 737 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 RAD51AP2Q09MP3 1159 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 TRIM14Q14142 442 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 SHHQ15465 462 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 BMT2Q1RMZ1 405 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 EDRF1Q3B7T1 1238 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 XKR9Q5GH70 373 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 TCP11X2Q5H9J9 407 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 C9orf50Q5SZB4 431 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 MAMDC4Q6UXC1 1216 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 ARMCX2Q7L311 632 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 CYFIP1Q7L576 1253 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 ZSCAN30Q86W11 494 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 FAM178BQ8IXR5 827 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 GOLGA5Q8TBA6 731 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 MYLIPQ8WY64 445 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 SEPT1Q8WYJ6 367 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 KIFAP3Q92845 792 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 HVCN1Q96D96 273 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 LBHD1Q9BQE6 289 aaPredicted RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 SRRTQ9BXP5 876 aaKnown RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 SAMSN1Q9NSI8 373 aaKnown RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 CGNQ9P2M7 1197 aaKnown RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 SEPT9Q9UHD8 586 aaPredicted RBP9.85□□□□□ -0.83
VPS50-207ENST00000458530 VPS9D1Q9Y2B5 631 aa9.85□□□□□ -0.83
VPS50-207ENST00000458530 EMSYQ7Z589 1322 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 SIP14410 1827 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 PIEZO1Q92508 2521 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 NPHP3-ACAD11A0A0J9YXS1 232 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 A0A1B0GTH6 734 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 TRIM49BA6NDI0 452 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 DNM1LO00429 736 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 N4BP3O15049 544 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
VPS50-207ENST00000458530 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 USO1O60763 962 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 HIP1RO75146 1068 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 OATP04181 439 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 RFC5P40937 340 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 RGS2P41220 211 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 MTIF2P46199 727 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 SMTNP53814 917 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 SP4Q02446 784 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 HSP90AA2PQ14568 343 aaPredicted RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 KRT31Q15323 416 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 KNOP1Q1ED39 458 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 ODR4Q5SWX8 454 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 CELF3Q5SZQ8 465 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 C1orf53Q5VUE5 145 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 SWSAP1Q6NVH7 229 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 HS2ST1Q7LGA3 356 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 TMC6Q7Z403 805 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 VSTM4Q8IW00 320 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 DHX37Q8IY37 1157 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 AFAP1L1Q8TED9 768 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 IQCDQ96DY2 449 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 CEP170P1Q96L14 293 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 FGD4Q96M96 766 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 JPH2Q9BR39 696 aaPredicted RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 ABHD16BQ9H3Z7 469 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 ATP6V0A4Q9HBG4 840 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 NRBP2Q9NSY0 501 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 TYW1Q9NV66 732 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 FLRT1Q9NZU1 646 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 WRAP73Q9P2S5 460 aaPredicted RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 DDX41Q9UJV9 622 aaKnown RBP9.84□□□□□ -0.83
VPS50-207ENST00000458530 PCDHA2Q9Y5H9 948 aa9.84□□□□□ -0.83
VPS50-207ENST00000458530 ITIH6Q6UXX5 1313 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 IGKV6D-21A0A0A0MT36 114 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 K7ENM7 598 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 PDXKO00764 312 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 CETN3O15182 167 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 MSCO60682 206 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 GH1P01241 217 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 TXNP10599 105 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms