RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NT5DC3Q86UY8 548 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 SMC1BQ8NDV3 1235 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 NT5C3AQ9H0P0 336 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 CHD4Q14839 1912 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 FAM196BA6NMK8 535 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 MARK3P27448 753 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 RPL21P46778 160 aaKnown RBP20.07■□□□□ 0.8
PTPA-223ENST00000452489 CBX3Q13185 183 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 DCAF12L1Q5VU92 463 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 ZNF571Q7Z3V5 609 aaPredicted RBP20.07■□□□□ 0.8
PTPA-223ENST00000452489 AGBL1Q96MI9 1066 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 MIPEPQ99797 713 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 GFPT2O94808 682 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 ITGA2BP08514 1039 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 CCDC166P0CW27 439 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 TAC1P20366 129 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 PLOD1Q02809 727 aaPredicted RBP20.06■□□□□ 0.8
PTPA-223ENST00000452489 ACSBG2Q5FVE4 666 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 CNNM4Q6P4Q7 775 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 CROCCP2Q86T23 111 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 CCDC25Q86WR0 208 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 KRT82Q9NSB4 513 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 SUCLA2Q9P2R7 463 aaPredicted RBP20.06■□□□□ 0.8
PTPA-223ENST00000452489 DIP2BQ9P265 1576 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 TMEM221A6NGB7 291 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 EYA4O95677 639 aa20.06■□□□□ 0.8
PTPA-223ENST00000452489 MKRN3Q13064 507 aaKnown RBP20.06■□□□□ 0.8
PTPA-223ENST00000452489 KPNB1Q14974 876 aaKnown RBP20.06■□□□□ 0.8
PTPA-223ENST00000452489 DUS1LQ6P1R4 473 aaKnown RBP20.06■□□□□ 0.8
PTPA-223ENST00000452489 FAM170AA1A519 330 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 BRAFP15056 766 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 YARSP54577 528 aaKnown RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 SLC34A1Q06495 639 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 ZNF211Q13398 564 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 GLIS3Q8NEA6 775 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 ABTB1Q969K4 478 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 SLC35B4Q969S0 331 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 C18orf8Q96DM3 657 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 CCSER1Q9C0I3 900 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 LTN1O94822 1766 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 FLT1P17948 1338 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 TCERG1LQ5VWI1 586 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 HS2ST1Q7LGA3 356 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 SLFN11Q7Z7L1 901 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 ENAHQ8N8S7 591 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 SNRNP27Q8WVK2 155 aaKnown RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 SPOCK2Q92563 424 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 HES6Q96HZ4 224 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 MAGEB18Q96M61 343 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 ZNF184Q99676 751 aaPredicted RBP20.05■□□□□ 0.8
PTPA-223ENST00000452489 C7orf25Q9BPX7 421 aa20.05■□□□□ 0.8
PTPA-223ENST00000452489 AP1B1Q10567 949 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 RASA3Q14644 834 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 KSR1Q8IVT5 923 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 RIBC1Q8N443 379 aaPredicted RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 MAGEB6Q8N7X4 407 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 DNAJC1Q96KC8 554 aaKnown RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 CENPKQ9BS16 269 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 ARMCX3Q9UH62 379 aaPredicted RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 NAGPAQ9UK23 515 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 SUGT1Q9Y2Z0 365 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 CNTNAP5Q8WYK1 1306 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 AKAP11Q9UKA4 1901 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 A0A0J9YVX5 310 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 MAP3K7O43318 606 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 SUPT3HO75486 399 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 ACSL3O95573 720 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 HNRNPCP07910 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
PTPA-223ENST00000452489 KRT13P13646 458 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 ZNF24P17028 368 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 MAPK7Q13164 816 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 LRRC41Q15345 812 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 EXOC3L4Q17RC7 722 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 CABP7Q86V35 215 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 SPATA24Q86W54 205 aa20.04■□□□□ 0.8
PTPA-223ENST00000452489 RNF168Q8IYW5 571 aaPredicted RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
PTPA-223ENST00000452489 ABCB11O95342 1321 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 PITPNM2Q9BZ72 1349 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 PLCG2P16885 1265 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 PPP1R2P41236 205 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 CDK7P50613 346 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 PPFIBP2Q8ND30 876 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 STKLD1Q8NE28 680 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 NAT14Q8WUY8 206 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 CLMNQ96JQ2 1002 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 ASCC2Q9H1I8 757 aaPredicted RBP20.03■□□□□ 0.8
PTPA-223ENST00000452489 WASF2Q9Y6W5 498 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 PASKQ96RG2 1323 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 MAPK13O15264 365 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 GSTA3Q16772 222 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
PTPA-223ENST00000452489 ALKBH5Q6P6C2 394 aaKnown RBP20.03■□□□□ 0.8
PTPA-223ENST00000452489 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms