RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 VPS52Q8N1B4 723 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 CASD1Q96PB1 797 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 ZBP1Q9H171 429 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 ELAC1Q9H777 363 aaKnown RBP11.9□□□□□ -0.5
CPNE1-214ENST00000435747 GINS2Q9Y248 185 aa11.9□□□□□ -0.5
CPNE1-214ENST00000435747 WDFY3Q8IZQ1 3526 aa11.9□□□□□ -0.51
CPNE1-214ENST00000435747 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.51
CPNE1-214ENST00000435747 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 FIBPO43427 364 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 DDAH1O94760 285 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.51
CPNE1-214ENST00000435747 SEMA3FQ13275 785 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 UBXN2BQ14CS0 331 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 CSRP2Q16527 193 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 CREB3L3Q68CJ9 461 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 TSSK4Q6SA08 328 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 INPP4AQ96PE3 977 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-214ENST00000435747 SPZ1Q9BXG8 430 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 FAM126AQ9BYI3 521 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-214ENST00000435747 IRAK3Q9Y616 596 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 EVPLQ92817 2033 aa11.89□□□□□ -0.51
CPNE1-214ENST00000435747 F5P12259 2224 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 AKAP13Q12802 2813 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 PNMA6FA0A0J9YX94 578 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 ERICH2A1L162 156 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 FAM170BA6NMN3 283 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 PRC1O43663 620 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 FOXD2O60548 495 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-214ENST00000435747 STAM2O75886 525 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 CTSAP10619 480 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 LIFRP42702 1097 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
CPNE1-214ENST00000435747 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 HOMER1Q86YM7 354 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 NME8Q8N427 588 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 CELF5Q8N6W0 485 aaKnown RBP11.88□□□□□ -0.51
CPNE1-214ENST00000435747 MYADMQ96S97 322 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 MYL10Q9BUA6 226 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 OSBPL6Q9BZF3 934 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 WDR6Q9NNW5 1121 aaKnown RBP11.88□□□□□ -0.51
CPNE1-214ENST00000435747 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 ST3GAL5Q9UNP4 418 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 NOC2LQ9Y3T9 749 aaKnown RBP11.88□□□□□ -0.51
CPNE1-214ENST00000435747 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
CPNE1-214ENST00000435747 CLUHO75153 1309 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SRRM3A6NNA2 597 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 TAF4O00268 1085 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 GPR182O15218 404 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 INSRRP14616 1297 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 MCM5P33992 734 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 FAM189BP81408 668 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 MRPS9P82933 396 aaKnown RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 EXOSC10Q01780 885 aaKnown RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SGMS1Q86VZ5 419 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 GIMAP8Q8ND71 665 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 PRMT8Q9NR22 394 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-214ENST00000435747 LOC400499M0QZD8 3231 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 LAMA5O15230 3695 aa11.87□□□□□ -0.51
CPNE1-214ENST00000435747 MEIS2O14770 477 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 KLRC2P26717 231 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-214ENST00000435747 PRKCQQ04759 706 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 MLF2Q15773 248 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-214ENST00000435747 ZBTB41Q5SVQ8 909 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-214ENST00000435747 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
CPNE1-214ENST00000435747 DDX23Q9BUQ8 820 aaKnown RBP11.86□□□□□ -0.51
CPNE1-214ENST00000435747 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 ANO2Q9NQ90 1003 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 RNF19AQ9NV58 838 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 NUMBLQ9Y6R0 609 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 COL4A3Q01955 1670 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 SPAG17Q6Q759 2223 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
CPNE1-214ENST00000435747 SMIM35A0A1B0GVV1 85 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 PIK3CDO00329 1044 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 CLCN4P51793 760 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 LIMK1P53667 647 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms