RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 EMC2Q15006 297 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 CELF3Q5SZQ8 465 aaKnown RBP15.65■□□□□ 0.1
CALD1-207ENST00000430085 SYT10Q6XYQ8 523 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 RRAGAQ7L523 313 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 TMEM161BQ8NDZ6 487 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 CEP72Q9P209 647 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
CALD1-207ENST00000430085 EPN1Q9Y6I3 576 aaPredicted RBP15.65■□□□□ 0.1
CALD1-207ENST00000430085 MANSC4A6NHS7 340 aaPredicted RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 NDUFA10O95299 355 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 SOX10P56693 466 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 ETF1P62495 437 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 CDK17Q00537 523 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 TTLL4Q14679 1199 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 ARMCX2Q7L311 632 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 ABRAQ8N0Z2 381 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 AFAP1L1Q8TED9 768 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 SLC7A3Q8WY07 619 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 SLC35C1Q96A29 364 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 BORCS6Q96GS4 357 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 PTPN18Q99952 460 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 POLR3FQ9H1D9 316 aaPredicted RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 NUCKS1Q9H1E3 243 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 XPNPEP1Q9NQW7 623 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 TBX20Q9UMR3 447 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 PLXNB2O15031 1838 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 DENND3A2RUS2 1198 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 LRRC53A6NM62 1247 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 H0YCG3 227 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 TXNP10599 105 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 EXOC3L4Q17RC7 722 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 C12orf56Q8IXR9 622 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 ACRBPQ8NEB7 543 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 SCFD2Q8WU76 684 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 BSNDQ8WZ55 320 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 GLG1Q92896 1179 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 FAM167AQ96KS9 214 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 PCYT2Q99447 389 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 NTPCRQ9BSD7 190 aaKnown RBP15.64■□□□□ 0.09
CALD1-207ENST00000430085 KIFC3Q9BVG8 833 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 PLAGL2Q9UPG8 496 aa15.64■□□□□ 0.09
CALD1-207ENST00000430085 IPO7O95373 1038 aaKnown RBP15.63■□□□□ 0.09
CALD1-207ENST00000430085 KRT13P13646 458 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
CALD1-207ENST00000430085 ABCD1P33897 745 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 RFC5P40937 340 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
CALD1-207ENST00000430085 PPP2R5AQ15172 486 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 ZNF792Q3KQV3 632 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 PDXDC1Q6P996 788 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 CCDC170Q8IYT3 715 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 MYRIPQ8NFW9 859 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 TMEM174Q8WUU8 243 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 BAP1Q92560 729 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 SPATA33Q96N06 139 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 GPR20Q99678 358 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 PCIF1Q9H4Z3 704 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 NHEJ1Q9H9Q4 299 aaPredicted RBP15.63■□□□□ 0.09
CALD1-207ENST00000430085 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 LZTFL1Q9NQ48 299 aa15.63■□□□□ 0.09
CALD1-207ENST00000430085 UQCRHLA0A096LP55 91 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 NOL4O94818 638 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 UQCRHP07919 91 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 MAP2K2P36507 400 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 FAM110CQ1W6H9 321 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 ARHGAP29Q52LW3 1261 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 CCDC62Q6P9F0 684 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 MAP4K3Q8IVH8 894 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 XXYLT1Q8NBI6 393 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 RDH13Q8NBN7 331 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 CBWD1Q9BRT8 395 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 DHX33Q9H6R0 707 aaKnown RBP15.62■□□□□ 0.09
CALD1-207ENST00000430085 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 PHLPP2Q6ZVD8 1323 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 GTPBP10A4D1E9 387 aaKnown RBP15.62■□□□□ 0.09
CALD1-207ENST00000430085 TISP43B9A030 160 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 IGF2BP3O00425 579 aaKnown RBP eCLIP15.62■□□□□ 0.09
CALD1-207ENST00000430085 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
CALD1-207ENST00000430085 TM4SF4P48230 202 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 GNG11P61952 73 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 KRT83P78385 493 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 SREBF2Q12772 1141 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 BFSP1Q12934 665 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 HSDL1Q3SXM5 330 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 TRIM65Q6PJ69 517 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 INTS8Q75QN2 995 aaKnown RBP15.62■□□□□ 0.09
CALD1-207ENST00000430085 GPR142Q7Z601 462 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 CCDC42Q96M95 316 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 PLCB1Q9NQ66 1216 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 HSPBP1Q9NZL4 362 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 GCNT4Q9P109 453 aa15.62■□□□□ 0.09
CALD1-207ENST00000430085 MCM3APO60318 1980 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms