RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ZBTB42B2RXF5 422 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 STK25O00506 426 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CHMP2AO43633 222 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 MARCH6O60337 910 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NR1I2O75469 434 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CLCN5P51795 746 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 FUT2Q10981 343 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 KCNC3Q14003 757 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BMP2KLQ5H9B9 411 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RARS2Q5T160 578 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ZNF410Q86VK4 478 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 VN1R2Q8NFZ6 395 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CYP26B1Q9NR63 512 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 KLRC2P26717 231 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CDC27P30260 824 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PRKCEQ02156 737 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ASTLQ6HA08 431 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 Q6ZUG5 572 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SNX27Q96L92 541 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 LIMD1Q9UGP4 676 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 FBXL21Q9UKT6 434 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
HLA-DQB3-203ENST00000425319 C2CD4DB7Z1M9 353 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CPLX1O14810 134 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CDC45O75419 566 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CTSAP10619 480 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PHKA2P46019 1235 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CCDC149Q6ZUS6 474 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CNNM3Q8NE01 707 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 STAMQ92783 540 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BRF1Q92994 677 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ZNF668Q96K58 619 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RTP3Q9BQQ7 232 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SLC26A6Q9BXS9 759 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 FAM86C1Q9NVL1 165 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 INPP5FQ9Y2H2 1132 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 REV3LO60673 3130 aa13.78□□□□□ -0.2
HLA-DQB3-203ENST00000425319 A0A087WZ62 844 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 MSH4O15457 936 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 XBP1P17861 261 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PBX3P40426 434 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 HACE1Q8IYU2 909 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CRYGNQ8WXF5 182 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 IGSF21Q96ID5 467 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 HCSTQ9UBK5 93 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ASAP2O43150 1006 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ZNF623O75123 536 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FGFR4P22455 802 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PSMC5P62195 406 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TDGQ13569 410 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 Q4G0T1 1027 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GALNT17Q6IS24 598 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NKD2Q969F2 451 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms