RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
SHANK2-207ENST00000425049 TCP11Q8WWU5 503 aa18.52■□□□□ 0.56
SHANK2-207ENST00000425049 TTC12Q9H892 705 aaPredicted RBP18.52■□□□□ 0.56
SHANK2-207ENST00000425049 CHST12Q9NRB3 414 aa18.52■□□□□ 0.56
SHANK2-207ENST00000425049 PIN4Q9Y237 131 aaKnown RBP18.52■□□□□ 0.56
SHANK2-207ENST00000425049 FAM50BQ9Y247 325 aa18.52■□□□□ 0.56
SHANK2-207ENST00000425049 COL4A3BPQ9Y5P4 624 aa18.52■□□□□ 0.56
SHANK2-207ENST00000425049 CSDE1O75534 798 aaKnown RBP18.51■□□□□ 0.55
SHANK2-207ENST00000425049 EMC2Q15006 297 aa18.51■□□□□ 0.55
SHANK2-207ENST00000425049 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
SHANK2-207ENST00000425049 EIF2AK1Q9BQI3 630 aaKnown RBP18.51■□□□□ 0.55
SHANK2-207ENST00000425049 BMP2KQ9NSY1 1161 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-207ENST00000425049 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
SHANK2-207ENST00000425049 WRAP73Q9P2S5 460 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-207ENST00000425049 NCOR1O75376 2440 aa18.51■□□□□ 0.55
SHANK2-207ENST00000425049 TCF20Q9UGU0 1960 aaKnown RBP18.5■□□□□ 0.55
SHANK2-207ENST00000425049 A0A0U1RQF3 1178 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 H3BQ06 376 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-207ENST00000425049 SKIP12755 728 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 MCM7P33993 719 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 UBE3AQ05086 875 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 PTCRAQ6ISU1 281 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-207ENST00000425049 KSR1Q8IVT5 923 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 COLGALT1Q8NBJ5 622 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 SPPL3Q8TCT6 385 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 TMEM143Q96AN5 459 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 MTRQ99707 1265 aa18.5■□□□□ 0.55
SHANK2-207ENST00000425049 DHX33Q9H6R0 707 aaKnown RBP18.5■□□□□ 0.55
SHANK2-207ENST00000425049 ST18O60284 1047 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 EOMESO95936 686 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 SRGAP2CP0DJJ0 459 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
SHANK2-207ENST00000425049 RABEP1Q15276 862 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 MRPL9Q9BYD2 267 aaKnown RBP18.49■□□□□ 0.55
SHANK2-207ENST00000425049 FOXP1Q9H334 677 aaPredicted RBP18.49■□□□□ 0.55
SHANK2-207ENST00000425049 IGFLR1Q9H665 355 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
SHANK2-207ENST00000425049 KIF3AQ9Y496 699 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
SHANK2-207ENST00000425049 ASAP2O43150 1006 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 FGF18O76093 207 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 SLITRK3O94933 977 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 PPM1AP35813 382 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 RAB27AP51159 221 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 HYAL1Q12794 435 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 ORC2Q13416 577 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-207ENST00000425049 SRGAP1Q7Z6B7 1085 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 ZNF579Q8NAF0 562 aaKnown RBP18.48■□□□□ 0.55
SHANK2-207ENST00000425049 PRPF31Q8WWY3 499 aaKnown RBP18.48■□□□□ 0.55
SHANK2-207ENST00000425049 RSPH1Q8WYR4 309 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 ZNF558Q96NG5 402 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 CASD1Q96PB1 797 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 KIF2CQ99661 725 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 TLR9Q9NR96 1032 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 HCSTQ9UBK5 93 aa18.48■□□□□ 0.55
SHANK2-207ENST00000425049 PUF60Q9UHX1 559 aaKnown RBP18.48■□□□□ 0.55
SHANK2-207ENST00000425049 POTEMA6NI47 508 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 WNT7AO00755 349 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 LYPLA2O95372 231 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 DNAJB1P25685 340 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 PHKA2P46019 1235 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 NDUFV1P49821 464 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 LAMTOR4Q0VGL1 99 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 TFDP1Q14186 410 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 COL19A1Q14993 1142 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 RNF149Q8NC42 400 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 FBXO18Q8NFZ0 1043 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-207ENST00000425049 ERMNQ8TAM6 284 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 HELQQ8TDG4 1101 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 MTMR9Q96QG7 549 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 CWH43Q9H720 699 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 ANKEF1Q9NU02 776 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 MYO7AQ13402 2215 aa18.47■□□□□ 0.55
SHANK2-207ENST00000425049 FNDC1Q4ZHG4 1894 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-207ENST00000425049 FSD2A1L4K1 749 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 DGAT1O75907 488 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 ERLIN2O94905 339 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 OR52Z1P0C646 297 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 SSTR3P32745 418 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-207ENST00000425049 IRS1P35568 1242 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 KRT17Q04695 432 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 CAMK1Q14012 370 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 MXD4Q14582 209 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-207ENST00000425049 CLLU1OSQ5K130 101 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 TTC38Q5R3I4 469 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 PDE12Q6L8Q7 609 aaKnown RBP18.46■□□□□ 0.55
SHANK2-207ENST00000425049 GLB1LQ6UWU2 654 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 ZNF598Q86UK7 904 aaKnown RBP18.46■□□□□ 0.55
SHANK2-207ENST00000425049 FERMT3Q86UX7 667 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 HSD17B14Q9BPX1 270 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 TRAIPQ9BWF2 469 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 TMEM60Q9H2L4 133 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 IFT122Q9HBG6 1241 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 FAM105AQ9NUU6 356 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 RNF19AQ9NV58 838 aa18.46■□□□□ 0.55
SHANK2-207ENST00000425049 GRXCR2A6NFK2 248 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms