RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PGRMC1O00264 195 aaKnown RBP10.71□□□□□ -0.69
MSH2-202ENST00000406134 CEP104O60308 925 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 CHRNA5P30532 468 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 COPB2P35606 906 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 EPS15P42566 896 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 BYSLQ13895 437 aaKnown RBP10.71□□□□□ -0.69
MSH2-202ENST00000406134 TMC3Q7Z5M5 1100 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 BCAS4Q8TDM0 211 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 U2AF1L4Q8WU68 220 aaKnown RBP10.71□□□□□ -0.69
MSH2-202ENST00000406134 CSRNP1Q96S65 589 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 INTS2Q9H0H0 1204 aaKnown RBP10.71□□□□□ -0.69
MSH2-202ENST00000406134 PARVGQ9HBI0 331 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 DNAJC12Q9UKB3 198 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 FLOT1O75955 427 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 TMEM253P0C7T8 217 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 VCAM1P19320 739 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 PSMC2P35998 433 aaKnown RBP10.71□□□□□ -0.7
MSH2-202ENST00000406134 PPP3CAQ08209 521 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 MYCT1Q8N699 235 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 GMLQ99445 158 aa10.71□□□□□ -0.7
MSH2-202ENST00000406134 ATXN2Q99700 1313 aaKnown RBP10.71□□□□□ -0.7
MSH2-202ENST00000406134 TP73O15350 636 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 DAPK3O43293 454 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 FERP16591 822 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 GUCY2CP25092 1073 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 HSPA1LP34931 641 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 TCERG1LQ5VWI1 586 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 FBXO28Q9NVF7 368 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 APEX2Q9UBZ4 518 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 SAMM50Q9Y512 469 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 WDR90Q96KV7 1748 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 FOXN3O00409 490 aaPredicted RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 H2AFZP0C0S5 128 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CHRNB2P17787 502 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 FNTAP49354 379 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 HSD17B4P51659 736 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.71e-6■■□□□ 13.4
MSH2-202ENST00000406134 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 TCEAL1Q15170 157 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 STYK1Q6J9G0 422 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CCDC174Q6PII3 467 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 ZDHHC24Q6UX98 284 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 H2AFVQ71UI9 128 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 LXNQ9BS40 222 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 TRIM51Q9BSJ1 452 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 LUC7LQ9NQ29 371 aaKnown RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 FAM169AQ9Y6X4 670 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 HIP1RO75146 1068 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 TBCAO75347 108 aaKnown RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 CFBP00751 764 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 NR1D1P20393 614 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 HADHBP55084 474 aaKnown RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 TNNC1P63316 161 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 BFSP1Q12934 665 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CUL1Q13616 776 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 PTGISQ16647 500 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 SPRED3Q2MJR0 410 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CFAP58Q5T655 872 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 RBM26Q5T8P6 1007 aaKnown RBP10.7□□□□□ -0.7
MSH2-202ENST00000406134 LRIG3Q6UXM1 1119 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 CLEC4DQ8WXI8 215 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.7□□□□□ -0.7
MSH2-202ENST00000406134 RFFLQ8WZ73 363 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 KAT5Q92993 513 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 TSPYL1Q9H0U9 437 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
MSH2-202ENST00000406134 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 MUTP22033 750 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 RPL13P26373 211 aaKnown RBP10.69□□□□□ -0.7
MSH2-202ENST00000406134 STAT1P42224 750 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 PTGIRP43119 386 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 NAA35Q5VZE5 725 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 DAAM2Q86T65 1068 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 CD101Q93033 1021 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 QTRT2Q9H974 415 aaKnown RBP10.69□□□□□ -0.7
MSH2-202ENST00000406134 ODF2LQ9ULJ1 636 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 USP20Q9Y2K6 914 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 TMEM150BA6NC51 233 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 CYP2J2P51589 502 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 SEC24CP53992 1094 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 PTENP60484 403 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 GHRHRQ02643 423 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 PPP2R5AQ15172 486 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 SIX1Q15475 284 aaPredicted RBP10.69□□□□□ -0.7
MSH2-202ENST00000406134 SKIDA1Q1XH10 827 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 DUPD1Q68J44 220 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 KCNV1Q6PIU1 500 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 C6orf89Q6UWU4 347 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 PEX26Q7Z412 305 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 KRT35Q92764 455 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms