RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 MAGEF1Q9HAY2 307 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 NMRK1Q9NWW6 199 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 ATP8B3O60423 1300 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 MYH1P12882 1939 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 SMAPO00193 183 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 KRIT1O00522 736 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 CETN3O15182 167 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 HNRNPCL1O60812 293 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 KLRC1P26715 233 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 SERPINB4P48594 390 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 CTSWP56202 376 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 RCN2Q14257 317 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 RASIP1Q5U651 963 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 UCMAQ8WVF2 138 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 CCDC97Q96F63 343 aaPredicted RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 STRBPQ96SI9 672 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 ROPN1BQ9BZX4 212 aaPredicted RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 OCEL1Q9H607 264 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 AZI2Q9H6S1 392 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 RMI1Q9H9A7 625 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 ROPN1Q9HAT0 212 aaPredicted RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 FGFR1OP2Q9NVK5 253 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 CACNA1SQ13698 1873 aa12.4□□□□□ -0.43
PUM3-202ENST00000397885 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.43
PUM3-202ENST00000397885 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 PDE8BO95263 885 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 SMYD1Q8NB12 490 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 LRRC8CQ8TDW0 803 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 CENPKQ9BS16 269 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 DISC1Q9NRI5 854 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 GGT7Q9UJ14 662 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 TRIM33Q9UPN9 1127 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 BZW2Q9Y6E2 419 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 CEP104O60308 925 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 PFDN1O60925 122 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 ATP9AO75110 1047 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 RASA1P20936 1047 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 MAGEA10P43363 369 aaPredicted RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 RNASE9P60153 205 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 POU5F1Q01860 360 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 SLC4A8Q2Y0W8 1093 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 ANKRD40Q6AI12 368 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 MFSD6Q6ZSS7 791 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 CKAP2Q8WWK9 683 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 DDX47Q9H0S4 455 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 CUEDC2Q9H467 287 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 GREM2Q9H772 168 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 LRRC4CQ9HCJ2 640 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 ZDHHC18Q9NUE0 388 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
PUM3-202ENST00000397885 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 MYH3P11055 1940 aa12.39□□□□□ -0.43
PUM3-202ENST00000397885 TCRBV5S4A2TA0A5A2 114 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 EPHB6O15197 1021 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 IDO1P14902 403 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 GM2AP17900 193 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 GNAT2P19087 354 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 ATP5DP30049 168 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 HOXA7P31268 230 aaPredicted RBP12.38□□□□□ -0.43
PUM3-202ENST00000397885 IFNAR2P48551 515 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 IFI35P80217 286 aaPredicted RBP12.38□□□□□ -0.43
PUM3-202ENST00000397885 MAP7Q14244 749 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 PUM3Q15397 648 aaKnown RBP12.38□□□□□ -0.43
PUM3-202ENST00000397885 ZNF174Q15697 407 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 AKNAD1Q5T1N1 836 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 NKX2-3Q8TAU0 364 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 TLE6Q9H808 572 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 TMEM165Q9HC07 324 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 NLRC4Q9NPP4 1024 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 FAM207AQ9NSI2 230 aaPredicted RBP12.38□□□□□ -0.43
PUM3-202ENST00000397885 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
PUM3-202ENST00000397885 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
PUM3-202ENST00000397885 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms