RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ATP2B1P20020 1258 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 NPEPPSP55786 919 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 CYP4A11Q02928 519 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 POU5F1BQ06416 359 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 TTC38Q5R3I4 469 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 PLA2G4FQ68DD2 849 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 SRGAP1Q7Z6B7 1085 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 PPP2R3CQ969Q6 453 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 NACC1Q96RE7 527 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 MTRQ99707 1265 aa15.55■□□□□ 0.08
SEC13-204ENST00000397099 POLR3CQ9BUI4 534 aaPredicted RBP15.55■□□□□ 0.08
SEC13-204ENST00000397099 A0A087WZ62 844 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 A0A0U1RQF3 1178 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 TMEM150BA6NC51 233 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 H3BQV1 296 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 MGEA5O60502 916 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 RPA1P27694 616 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 FXR2P51116 673 aaKnown RBP eCLIP15.54■□□□□ 0.08
SEC13-204ENST00000397099 RAB27AP51159 221 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 NCBP1Q09161 790 aaKnown RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 TFDP1Q14186 410 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 PDIA5Q14554 519 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 EMC2Q15006 297 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 RILPL1Q5EBL4 403 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 EP400NLQ6ZTU2 488 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 ABI1Q8IZP0 508 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 FDXACB1Q9BRP7 624 aaPredicted RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 TMEM117Q9H0C3 514 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 UBE2ZQ9H832 354 aaPredicted RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
SEC13-204ENST00000397099 SMC3Q9UQE7 1217 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 PCDHB12Q9Y5F1 795 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 TTC28Q96AY4 2481 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 NCOR1O75376 2440 aa15.54■□□□□ 0.08
SEC13-204ENST00000397099 FSD2A1L4K1 749 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 CSPG5O95196 566 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 LINC00271P0C7V0 271 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 KCNA5P22460 613 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 PRPHP41219 470 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 UBE3AQ05086 875 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 LAMTOR4Q0VGL1 99 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 DRP2Q13474 957 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 ZNF174Q15697 407 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 ECHDC2Q86YB7 292 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 NLRP4Q96MN2 994 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
SEC13-204ENST00000397099 TMEM60Q9H2L4 133 aa15.53■□□□□ 0.08
SEC13-204ENST00000397099 DBR1Q9UK59 544 aaKnown RBP15.53■□□□□ 0.08
SEC13-204ENST00000397099 KIAA1671Q9BY89 1806 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 TBKBP1A7MCY6 615 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 WNT7AO00755 349 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 LAG3P18627 525 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 GJB2P29033 226 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 AXLP30530 894 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 TECP42680 631 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 PHKA2P46019 1235 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 RARRES1P49788 294 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 PAN2Q504Q3 1202 aaKnown RBP15.52■□□□□ 0.08
SEC13-204ENST00000397099 TCEAL5Q5H9L2 206 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 SPOUT1Q5T280 376 aaKnown RBP15.52■□□□□ 0.08
SEC13-204ENST00000397099 CATSPER4Q7RTX7 472 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 KCTD17Q8N5Z5 321 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 NFKBIZQ9BYH8 718 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 BACH2Q9BYV9 841 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 NSUN3Q9H649 340 aaKnown RBP15.52■□□□□ 0.08
SEC13-204ENST00000397099 IFT122Q9HBG6 1241 aa15.52■□□□□ 0.08
SEC13-204ENST00000397099 MRPL42Q9Y6G3 142 aaKnown RBP15.52■□□□□ 0.08
SEC13-204ENST00000397099 TCF20Q9UGU0 1960 aaKnown RBP15.52■□□□□ 0.07
SEC13-204ENST00000397099 POTEMA6NI47 508 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 ZNF623O75123 536 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 PDCP20941 246 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 PPM1AP35813 382 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 MCTP1Q6DN14 999 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 TWF2Q6IBS0 349 aaKnown RBP15.51■□□□□ 0.07
SEC13-204ENST00000397099 PDE12Q6L8Q7 609 aaKnown RBP15.51■□□□□ 0.07
SEC13-204ENST00000397099 CATSPER3Q86XQ3 398 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
SEC13-204ENST00000397099 LRRC43Q8N309 656 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 PGBD4Q96DM1 585 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 CCDC51Q96ER9 411 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 AGPAT5Q9NUQ2 364 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 PLAGL2Q9UPG8 496 aa15.51■□□□□ 0.07
SEC13-204ENST00000397099 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
SEC13-204ENST00000397099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.5■□□□□ 0.07
SEC13-204ENST00000397099 GRM6O15303 877 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 ERLIN2O94905 339 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 SRGAP2CP0DJJ0 459 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 SPATA31C1P0DKV0 1188 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 PTGDRQ13258 359 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
SEC13-204ENST00000397099 DTHD1Q6ZMT9 781 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 C4orf32Q8N8J7 132 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms