RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 STAG1Q8WVM7 1258 aa18.61■□□□□ 0.57
MCF2L-208ENST00000397030 RAPGEF5Q92565 580 aa18.61■□□□□ 0.57
MCF2L-208ENST00000397030 VPS11Q9H270 941 aa18.61■□□□□ 0.57
MCF2L-208ENST00000397030 ANAPC7Q9UJX3 599 aa18.61■□□□□ 0.57
MCF2L-208ENST00000397030 CYP2E1P05181 493 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-208ENST00000397030 RCSD1Q6JBY9 416 aa18.61■□□□□ 0.57
MCF2L-208ENST00000397030 CCL15-CCL14A0A0B4J2E2 113 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 CCL15Q16663 113 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SFR1Q86XK3 245 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 A6NNZ2 444 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 PPP3CCP48454 512 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 TUBB8Q3ZCM7 444 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 TTC8Q8TAM2 541 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 TEX12Q9BXU0 123 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 CAPS2Q9BXY5 557 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 PRPF3O43395 683 aaKnown RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SULT1E1P49888 294 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 PRAMEP78395 509 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SLFNL1Q499Z3 407 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 EFHC2Q5JST6 749 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 EIF4A3P38919 411 aaKnown RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SLC35F6Q8N357 371 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 MCPH1Q8NEM0 835 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 ATXN7L3BQ96GX2 97 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SYTL2Q9HCH5 934 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SAMSN1Q9NSI8 373 aaKnown RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 L3MBTL1Q9Y468 752 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 SCINQ9Y6U3 715 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 HIP1RO75146 1068 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 CENPAP49450 140 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 RFWD2Q8NHY2 731 aa18.6■□□□□ 0.57
MCF2L-208ENST00000397030 POLR3CQ9BUI4 534 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-208ENST00000397030 ARIH2O95376 493 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 OR6P1Q8NGX9 317 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 ZNF512Q96ME7 567 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 GGA3Q9NZ52 723 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 MAP3K13O43283 966 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 TJP3O95049 919 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 LIG3P49916 1009 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 LMBRD2Q68DH5 695 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 CEP95Q96GE4 821 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 DHX35Q9H5Z1 703 aaKnown RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 NHEJ1Q9H9Q4 299 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 MEI1Q5TIA1 1274 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 PODNQ7Z5L7 613 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 HIPK4Q8NE63 616 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 AIFM3Q96NN9 605 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 CYP21A2P08686 494 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 HAUS4Q9H6D7 363 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 PPP6R2O75170 966 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 MAP4P27816 1152 aaKnown RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 SELENONQ9NZV5 590 aa18.59■□□□□ 0.57
MCF2L-208ENST00000397030 FAF1Q9UNN5 650 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-208ENST00000397030 E9PMD0 336 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 MYO1DO94832 1006 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 SERPING1P05155 500 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 SAYSD1Q9NPB0 183 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 C6orf203Q9P0P8 240 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-208ENST00000397030 SDC4P31431 198 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 PSMC1P62191 440 aaKnown RBP18.58■□□□□ 0.57
MCF2L-208ENST00000397030 SEPT8Q92599 483 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 DNAJC12Q9UKB3 198 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 STAP1Q9ULZ2 295 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 PGRMC1O00264 195 aaKnown RBP18.58■□□□□ 0.57
MCF2L-208ENST00000397030 ACSL3O95573 720 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 AP3B2Q13367 1082 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 ADGRF4Q8IZF3 695 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 MTMR6Q9Y217 621 aa18.58■□□□□ 0.57
MCF2L-208ENST00000397030 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
MCF2L-208ENST00000397030 TRAPPC3O43617 180 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 RPS6KA5O75582 802 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 CENPUQ71F23 418 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 BTN2A2Q8WVV5 523 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 MAGEB5Q9BZ81 275 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.568e-8■□□□□ 11.2
MCF2L-208ENST00000397030 CAPN11Q9UMQ6 739 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 IQANK1A0A1B0GTG1 560 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 MCAMP43121 646 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 KRT76Q01546 638 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 FAM133BQ5BKY9 247 aaKnown RBP18.58■□□□□ 0.56
MCF2L-208ENST00000397030 IL31Q6EBC2 164 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 TTC17Q96AE7 1141 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 C11orf70Q9BRQ4 267 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 CENPKQ9BS16 269 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 LSG1Q9H089 658 aaKnown RBP18.58■□□□□ 0.56
MCF2L-208ENST00000397030 SLC9A2Q9UBY0 812 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 CCNYL1Q8N7R7 359 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 CCHCR1Q8TD31 782 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 SCG3Q8WXD2 468 aaKnown RBP18.58■□□□□ 0.56
MCF2L-208ENST00000397030 KATNAL1Q9BW62 490 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms