RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IGBP1P78318 339 aa15.06■□□□□ 0
VAPB-202ENST00000395802 GTF2BQ00403 316 aa15.06■□□□□ 0
VAPB-202ENST00000395802 FKBP3Q00688 224 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
VAPB-202ENST00000395802 SYCP3Q8IZU3 236 aa15.06■□□□□ 0
VAPB-202ENST00000395802 ARRDC4Q8NCT1 418 aa15.06■□□□□ 0
VAPB-202ENST00000395802 DEPTORQ8TB45 409 aa15.06■□□□□ 0
VAPB-202ENST00000395802 KAT2BQ92831 832 aa15.06■□□□□ 0
VAPB-202ENST00000395802 ACCSQ96QU6 501 aa15.06■□□□□ 0
VAPB-202ENST00000395802 FIZ1Q96SL8 496 aa15.06■□□□□ 0
VAPB-202ENST00000395802 MAP7D2Q96T17 732 aa15.06■□□□□ 0
VAPB-202ENST00000395802 THAP9Q9H5L6 903 aa15.06■□□□□ 0
VAPB-202ENST00000395802 TYW1Q9NV66 732 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 MAGEC2Q9UBF1 373 aaPredicted RBP15.06■□□□□ 0
VAPB-202ENST00000395802 MOXD2PA6NHM9 499 aa15.06■□□□□ 0
VAPB-202ENST00000395802 C22orf31O95567 290 aa15.06■□□□□ 0
VAPB-202ENST00000395802 GNA14O95837 355 aa15.06■□□□□ 0
VAPB-202ENST00000395802 SMIM10L2AP0DMW4 78 aa15.06■□□□□ 0
VAPB-202ENST00000395802 SMIM10L2BP0DMW5 78 aa15.06■□□□□ 0
VAPB-202ENST00000395802 MYBP10242 640 aa15.06■□□□□ 0
VAPB-202ENST00000395802 PLCB2Q00722 1185 aa15.06■□□□□ 0
VAPB-202ENST00000395802 STRN3Q13033 797 aa15.06■□□□□ 0
VAPB-202ENST00000395802 TTI2Q6NXR4 508 aa15.06■□□□□ 0
VAPB-202ENST00000395802 MTHFD1LQ6UB35 978 aa15.06■□□□□ 0
VAPB-202ENST00000395802 KLHDC9Q8NEP7 349 aa15.06■□□□□ 0
VAPB-202ENST00000395802 TSEN34Q9BSV6 310 aaKnown RBP15.06■□□□□ 0
VAPB-202ENST00000395802 GBP3Q9H0R5 595 aa15.06■□□□□ 0
VAPB-202ENST00000395802 C2orf40Q9H1Z8 148 aa15.06■□□□□ 0
VAPB-202ENST00000395802 POLD4Q9HCU8 107 aa15.06■□□□□ 0
VAPB-202ENST00000395802 FANCLQ9NW38 375 aa15.06■□□□□ 0
VAPB-202ENST00000395802 SUCLA2Q9P2R7 463 aaPredicted RBP15.06■□□□□ 0
VAPB-202ENST00000395802 TRAF3IP3Q9Y228 551 aa15.06■□□□□ 0
VAPB-202ENST00000395802 CEP350Q5VT06 3117 aa15.05■□□□□ -0
VAPB-202ENST00000395802 PPP1R37O75864 691 aa15.05■□□□□ -0
VAPB-202ENST00000395802 PRPF6O94906 941 aaKnown RBP15.05■□□□□ -0
VAPB-202ENST00000395802 TPM2P07951 284 aa15.05■□□□□ -0
VAPB-202ENST00000395802 CASP5P51878 434 aa15.05■□□□□ -0
VAPB-202ENST00000395802 POU5F1BQ06416 359 aa15.05■□□□□ -0
VAPB-202ENST00000395802 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
VAPB-202ENST00000395802 ANKRD40Q6AI12 368 aa15.05■□□□□ -0
VAPB-202ENST00000395802 NFRKBQ6P4R8 1299 aa15.05■□□□□ -0
VAPB-202ENST00000395802 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
VAPB-202ENST00000395802 NELFCDQ8IXH7 590 aa15.05■□□□□ -0
VAPB-202ENST00000395802 TMEM161BQ8NDZ6 487 aa15.05■□□□□ -0
VAPB-202ENST00000395802 PRPF31Q8WWY3 499 aaKnown RBP15.05■□□□□ -0
VAPB-202ENST00000395802 STRA6Q9BX79 667 aa15.05■□□□□ -0
VAPB-202ENST00000395802 KCTD10Q9H3F6 313 aa15.05■□□□□ -0
VAPB-202ENST00000395802 SEMA6BQ9H3T3 888 aa15.05■□□□□ -0
VAPB-202ENST00000395802 C17orf102A2RUQ5 167 aa15.04■□□□□ -0
VAPB-202ENST00000395802 SLC16A4O15374 487 aa15.04■□□□□ -0
VAPB-202ENST00000395802 GLRA2P23416 452 aa15.04■□□□□ -0
VAPB-202ENST00000395802 EEF1GP26641 437 aaKnown RBP15.04■□□□□ -0
VAPB-202ENST00000395802 CHMP4BP1P59074 171 aa15.04■□□□□ -0
VAPB-202ENST00000395802 MYBPC2Q14324 1141 aa15.04■□□□□ -0
VAPB-202ENST00000395802 NFIL3Q16649 462 aa15.04■□□□□ -0
VAPB-202ENST00000395802 SARM1Q6SZW1 724 aa15.04■□□□□ -0
VAPB-202ENST00000395802 CTU1Q7Z7A3 348 aaKnown RBP15.04■□□□□ -0
VAPB-202ENST00000395802 CEP63Q96MT8 703 aa15.04■□□□□ -0
VAPB-202ENST00000395802 SEZ6LQ9BYH1 1024 aa15.04■□□□□ -0
VAPB-202ENST00000395802 TMEM134Q9H6X4 195 aa15.04■□□□□ -0
VAPB-202ENST00000395802 ARHGAP28Q9P2N2 729 aa15.04■□□□□ -0
VAPB-202ENST00000395802 TBX20Q9UMR3 447 aa15.04■□□□□ -0
VAPB-202ENST00000395802 DENND3A2RUS2 1198 aa15.03■□□□□ -0
VAPB-202ENST00000395802 TRIM49BA6NDI0 452 aa15.03■□□□□ -0
VAPB-202ENST00000395802 LRRIQ4A6NIV6 560 aa15.03■□□□□ -0
VAPB-202ENST00000395802 K7ERI5 159 aa15.03■□□□□ -0
VAPB-202ENST00000395802 CETN3O15182 167 aa15.03■□□□□ -0
VAPB-202ENST00000395802 CBFA2T2O43439 604 aa15.03■□□□□ -0
VAPB-202ENST00000395802 SERPINC1P01008 464 aa15.03■□□□□ -0
VAPB-202ENST00000395802 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
VAPB-202ENST00000395802 ASGR1P07306 291 aa15.03■□□□□ -0
VAPB-202ENST00000395802 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
VAPB-202ENST00000395802 LAMTOR4Q0VGL1 99 aa15.03■□□□□ -0
VAPB-202ENST00000395802 KCNA10Q16322 511 aa15.03■□□□□ -0
VAPB-202ENST00000395802 RHPN2Q8IUC4 686 aa15.03■□□□□ -0
VAPB-202ENST00000395802 GLIS3Q8NEA6 775 aa15.03■□□□□ -0
VAPB-202ENST00000395802 LMBR1Q8WVP7 490 aa15.03■□□□□ -0
VAPB-202ENST00000395802 SRRTQ9BXP5 876 aaKnown RBP15.03■□□□□ -0
VAPB-202ENST00000395802 NFKBIZQ9BYH8 718 aa15.03■□□□□ -0
VAPB-202ENST00000395802 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.03■□□□□ -02e-9■■■■■ 28.8
VAPB-202ENST00000395802 SETD4Q9NVD3 440 aa15.03■□□□□ -0
VAPB-202ENST00000395802 KAT6AQ92794 2004 aa15.03■□□□□ -0
VAPB-202ENST00000395802 SMIM35A0A1B0GVV1 85 aa15.03■□□□□ -0
VAPB-202ENST00000395802 MBLAC1A4D2B0 266 aaPredicted RBP15.03■□□□□ -0
VAPB-202ENST00000395802 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
VAPB-202ENST00000395802 ZNF18P17022 549 aa15.03■□□□□ -0
VAPB-202ENST00000395802 SOX10P56693 466 aa15.03■□□□□ -0
VAPB-202ENST00000395802 ADAM9Q13443 819 aa15.03■□□□□ -0
VAPB-202ENST00000395802 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
VAPB-202ENST00000395802 ZCWPW2Q504Y3 356 aa15.03■□□□□ -0
VAPB-202ENST00000395802 ZC2HC1CQ53FD0 456 aaPredicted RBP15.03■□□□□ -0
VAPB-202ENST00000395802 TAF2Q6P1X5 1199 aa15.03■□□□□ -0
VAPB-202ENST00000395802 CXCL17Q6UXB2 119 aa15.03■□□□□ -0
VAPB-202ENST00000395802 MAP4K3Q8IVH8 894 aa15.03■□□□□ -0
VAPB-202ENST00000395802 NME8Q8N427 588 aa15.03■□□□□ -0
VAPB-202ENST00000395802 LRRC71Q8N4P6 559 aa15.03■□□□□ -0
VAPB-202ENST00000395802 TMEM174Q8WUU8 243 aa15.03■□□□□ -0
VAPB-202ENST00000395802 TRAPPC12Q8WVT3 735 aa15.03■□□□□ -0
VAPB-202ENST00000395802 GLT1D1Q96MS3 346 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms