RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TRERF1Q96PN7 1200 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 GSDMAQ96QA5 445 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 BPIFA3Q9BQP9 254 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 PYM1Q9BRP8 204 aaKnown RBP6.52□□□□□ -1.37
CASC3-202ENST00000394114 XPO4Q9C0E2 1151 aaKnown RBP6.52□□□□□ -1.37
CASC3-202ENST00000394114 SUV39H2Q9H5I1 410 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 SAMSN1Q9NSI8 373 aaKnown RBP6.52□□□□□ -1.37
CASC3-202ENST00000394114 BLOC1S4Q9NUP1 217 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 CTNND2Q9UQB3 1225 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 NFE2L3Q9Y4A8 694 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 CSADQ9Y600 493 aa6.52□□□□□ -1.37
CASC3-202ENST00000394114 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
CASC3-202ENST00000394114 SMTNL1A8MU46 457 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 E9PMD0 336 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 DDX39AO00148 427 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 MEIS1O00470 390 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 ZBED4O75132 1171 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 EIF2AK2P19525 551 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 TPM4P67936 248 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 SNRNP48Q6IEG0 339 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 POTEGQ6S5H5 508 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 CREBRFQ8IUR6 639 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 TRIML1Q8N9V2 468 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 ETNPPLQ8TBG4 499 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 LARP4BQ92615 738 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 EEF2KMTQ96G04 330 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 AFG3L2Q9Y4W6 797 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 SYNRGQ9UMZ2 1314 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 IGLV3-22A0A075B6J6 115 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 CYP3A7-CYP3A51PA0A087WV96 503 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 GLTPD2A6NH11 291 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 TRAF5O00463 557 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 IKBKBO14920 756 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 BPNT1O95861 308 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 SERPINC1P01008 464 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 IDEP14735 1019 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 CYP3A7P24462 503 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 RPS6P62753 249 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 NFKB2Q00653 900 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 SEPT6Q14141 434 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 PDIA5Q14554 519 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 ZRSR2Q15696 482 aaKnown RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 CTC1Q2NKJ3 1217 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 MAP1SQ66K74 1059 aaPredicted RBP6.51□□□□□ -1.37
CASC3-202ENST00000394114 GADL1Q6ZQY3 521 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 SV2BQ7L1I2 683 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 CCDC186Q7Z3E2 898 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 C14orf80Q86SX3 495 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 MYO1HQ8N1T3 1032 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 NKD1Q969G9 470 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 TRIM9Q9C026 710 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 TMPRSS4Q9NRS4 437 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 RNF146Q9NTX7 359 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
CASC3-202ENST00000394114 WDR90Q96KV7 1748 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 MYMKA6NI61 221 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 KLRC4O43908 158 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 MED24O75448 989 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 ARP10275 920 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 FCER1AP12319 257 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 MYCLP12524 364 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 MSNP26038 577 aaKnown RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 IREB2P48200 963 aaKnown RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 SH3BP2P78314 561 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 COG2Q14746 738 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 TMEM132BQ14DG7 1078 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 Q4G0T1 1027 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 CEP55Q53EZ4 464 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 SARM1Q6SZW1 724 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 USP50Q70EL3 339 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 ZSCAN30Q86W11 494 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 SLFN12Q8IYM2 578 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 C17orf53Q8N3J3 647 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 TAAR1Q96RJ0 339 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 NAP1L4Q99733 375 aaKnown RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 POLD4Q9HCU8 107 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 RGL1Q9NZL6 768 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 ZNF232Q9UNY5 417 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 TRIM49BA6NDI0 452 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 C19orf81C9J6K1 198 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 CIITAP33076 1130 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 NF2P35240 595 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 PRCPP42785 496 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 HSD17B4P51659 736 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 PSMC6P62333 389 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 POU5F1BQ06416 359 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 SPIRE1Q08AE8 756 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 LRMPQ12912 555 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 BAATQ14032 418 aaPredicted RBP6.5□□□□□ -1.37
CASC3-202ENST00000394114 FXNQ16595 210 aa6.5□□□□□ -1.37
CASC3-202ENST00000394114 NOL9Q5SY16 702 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms